Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq9355 190 4e-43 seq580 161 2e-34 seq582 158 2e-33 seq583 105 1e-17 seq4313 98.7 2e-15 seq4583 86.0 1e-11 >seq9355 Length=14546 Score = 190 bits (210), Expect = 4e-43 Identities = 349/509 (69%), Gaps = 2/509 (0%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| |||||||| |||| || |||| |||||| ||| ||||||| |||||| || | Sbjct 2435 CATGTCCCCAATCACGCTGAGCATCCAGGTTCCCAAGGTACAGGCACGACTGCTTTCCCA 2376 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 || | || | | | || || | || ||||||||| ||| || | | Sbjct 2375 GCGAGATATCAGCCGCCGCTCTCGAAATCTTCCTCGTAACGAACGTCCGGCCTCGCCGTG 2316 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 |||||||||||||||| | ||| ||||| ||||| |||| || |||||||| ||||| | Sbjct 2315 GGCTCTCGTGGTTGAACAAGATCCCGTTACACGCATACATCCCGTATGCCTCGCGGTAAT 2256 Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523 | ||| ||||| | || | | ||| || |||| || || || || | ||| | Sbjct 2255 TAGTGACTATCCAGAAGGCGTAGAGCTTGGCGCACCCGTAGGGCGACCGGGGGTAGAATG 2196 Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583 | || || |||||||| | || ||| ||||| | | ||| || ||||| || | Sbjct 2195 GGGTTGTCTCACTTTGAGGGGTCTCCACGACCTTGCCGTATAACTCAGACGTCGACGCCT 2136 Query 268584 GGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 ||||||| | || || ||||| |||||| | ||||| || ||||||| || || Sbjct 2135 GGTAGAATCGCACATG-CTTCTCGAGCCCGCAGGTCCGGATGGCGTCGAGCAGCCGCAGC 2077 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 || |||| || || |||||| | || || || | ||| ||||| || || | |||||| Sbjct 2076 GTGCCCAGCCCGTCGACGTCCCCAGTGTATTCGGCCATTTCGAAGGAGACTTTGACATGC 2017 Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGG 268762 || || || ||||| || ||||| || | |||||| | ||| | ||||||| Sbjct 2016 GATTGCGCTCCGAGGTTGTACACCTCCGTGGGCTGGACCTGAGCGATGATGTACACGAGG 1957 Query 268763 TTCGTTGAGTCGGTGAGGTCTCCGTAGTG 268791 || || |||| |||| || |||||||| Sbjct 1956 TTGGTGCTGTCGCTGAGATCGCCGTAGTG 1928 >seq580 Length=8796 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| || ||||| || || ||| Sbjct 8072 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAG 8131 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | ||| || || || || ||||| | || |||||||| ||| Sbjct 8132 AGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGA 8191 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||| |||||||| || || ||| || |||||||| | ||| || || Sbjct 8192 ATGCCTTCTTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACC 8251 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || ||||| |||||||||||||| || ||||| Sbjct 8252 TCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || ||| || ||||| || ||||| || | || | |||||||| | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||||||||| || || |||| ||| || ||||| ||||| ||||||||||| || | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||||||| |||||||| || | || || || || | |||||| || || | Sbjct 7983 TCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTAC 8042 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||||||||| || ||||| Sbjct 8043 CAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 104 bits (114), Expect = 4e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| || ||||| || |||||| Sbjct 8300 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAG 8359 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| || ||||| ||||| | ||||||||||| ||| Sbjct 8360 AGAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGGA 8419 Query 68355 ATGCCTT 68361 |||| || Sbjct 8420 ATGCTTT 8426 >seq582 Length=4044 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | |||| || ||||| |||||||| || |||||||| || ||| Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || ||||| | ||| || || || || Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| ||||| ||| || || ||||| | || || || Sbjct 3417 ATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACC 3476 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || || || | |||||||| || |||||||| Sbjct 3477 TCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 158 bits (174), Expect = 2e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68256 AAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAAC 68315 ||||| || || ||||| || || ||||| || ||||| | ||||| ||||| || | | Sbjct 3596 AAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGC 3655 Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375 || ||||| ||||| || || | || ||||| || ||||| || ||||| || |||||| Sbjct 3656 TGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATC 3715 Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCC 68435 || |||||||| || |||||||| | || || || || | ||| ||||||||||| Sbjct 3716 TTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCG 3775 Query 68436 GTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||||||||||||||||||||| Sbjct 3776 GTCAACGTCTTGACGAATATCTGCATT 3802 Score = 132 bits (146), Expect = 9e-26 Identities = 135/175 (77%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || || ||||| || || |||||||||||||| || || | ||||||| Sbjct 3870 TACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTT 3929 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||| |||||||| || || | | |||||||| || |||||||| |||||||||| Sbjct 3930 CCAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTT 3989 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425 | ||||| |||||||| ||||| ||||| | || || || || | |||||| Sbjct 3990 GGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGAT 4044 >seq583 Length=22390 Score = 105 bits (116), Expect = 1e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || ||||| || | || || || ||||| || |||||||| ||||| | Sbjct 80 TTCCTCCACGCAGACGCAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAG 139 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | || || || | |||||| |||||||| ||||||| |||||||||||| | Sbjct 140 AGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCG 199 Query 68353 GAATGC 68358 | |||| Sbjct 200 GGATGC 205 >seq4313 Length=23148 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| |||||||| || |||||| ||||| ||||| | ||||| || || Sbjct 10721 CCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATAGTGTCCGAGGATTCAACCTCA 10662 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || |||||||||||||||||||| |||||||| Sbjct 10661 AGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 10618 >seq4583 Length=9780 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 9945 GCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATG 10004 ||||| ||| || || || || |||||||||||| | |||||||| ||| || || Sbjct 7527 GCCTTTGAGTAATCTGACACGCGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATC 7468 Query 10005 AGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTG 10064 | ||||||||||| ||||||||| | | || |||| || || || ||| Sbjct 7467 ATGTCCATGAAGTCGAAGGGGTTCGTTGAGTTGTACACCTTGTCGTTGCCAAGGGCTACA 7408 Query 10065 AAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATC 10124 | | || || || || ||||| ||||| |||| ||| || | |||||||||||||| Sbjct 7407 AGCAGACGATCGGCGACAAACTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAATG 7348 Query 10125 ATGCGGCAGGGGATGGCGTC 10144 | | ||||| |||||| Sbjct 7347 AGAGAGACGGGGAGGGCGTC 7328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921341270607160