Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4584 181 2e-40 seq6019 167 4e-36 seq4583 167 4e-36 seq6955 159 7e-34 >seq4584 Length=6343 Score = 181 bits (200), Expect = 2e-40 Identities = 326/474 (69%), Gaps = 18/474 (4%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||| || || || ||||||||||| || || |||||||| | | | ||| | Sbjct 3308 CTCGCCTTTTTTGCTGCTTCTGACGGCATCGTTAACGAGAACCTCGTCGAACGTTTCTCG 3367 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 ||||| || ||| ||| || || |||||||| || |||||||| || ||||| Sbjct 3368 AAAGAAGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAAT 3427 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | || || ||| || | || || |||| |||||| || |||| | || | Sbjct 3428 ATTCATTCCGAGACCTATTCTCTCCTTATCGACACATACATCAAAGACCCCGCCCAGAGG 3487 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | ||||| ||||| || || |||||||| || || |||||||| Sbjct 3488 GAATATCTTTTTGATGCCATCGAGACCATTCCTTGCATCAAACGCAAAGCTGACTGGGCC 3547 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTC-------GGCGAGAGGCTGGTAGCCTT 42715 || |||||||| |||| | ||||||| | |||| | || |||||||| Sbjct 3548 CTTCACTGGATC------TCCGATG-AACGTTCCACCTTTGCCGAGCGTCTCGTAGCCTT 3600 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | ||||||| || ||||| |||||||| ||| | || || |||||||| ||| | ||| | Sbjct 3601 TGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCTTTTGCTTCCATCTTTTGGTTGAAGAA 3660 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||| || ||||| ||||| ||||| ||||||||| | || ||||| | Sbjct 3661 GCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGATGAGGGCAT 3720 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC 42889 ||| | ||||||| || || || ||| ||||| || | || | |||||| Sbjct 3721 GCACACCGACTTTGGATGTCTTCTCTTC---AGCCATCTAAAGCGC-CGCCCTC 3770 >seq6019 Length=9942 Score = 167 bits (184), Expect = 4e-36 Identities = 360/535 (67%), Gaps = 19/535 (4%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || || || || || || |||||||| ||||| ||||| || | | | ||| | Sbjct 1776 CTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGAACGTTTCTCG 1835 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 |||||||| ||| ||| || || |||||||| ||||||||||| || ||||| Sbjct 1836 AAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAAT 1895 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | || || ||| || | || || | ||||||||| || |||| | || | Sbjct 1896 ATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGG 1955 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | || | ||||| || || |||||||| || || |||||||| Sbjct 1956 GAATATCTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTGACTGGGCC 2015 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTC-------GGCGAGAGGCTGGTAGCCTT 42715 || ||||||| |||| | ||||||| | ||| | || |||||||| Sbjct 2016 CTTCGCTGGATC------TCCGATG-AACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTT 2068 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 ||||||| || ||||| |||||||| ||| | || || |||||||| ||| | ||| | Sbjct 2069 CGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTGAAGAA 2128 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||| || ||||| ||||| ||||| ||||||||| | |||||||| | Sbjct 2129 GCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGGGCAT 2188 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGG 42894 ||| | ||||||| || || || ||| ||||| || | || |||||| || Sbjct 2189 GCACACCGACTTTGGATGTCTTCTCTTC---AGCCATCTAAAGC-GTCGCCCTCATCCGG 2244 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 | ||| | ||| ||||| || ||||| | ||||| |||| ||||| || Sbjct 2245 AAGTCGTCAAGCGCATTATCACTGATGCCGTTGCCATCGAACAGGAATTCCTTAC 2299 >seq4583 Length=9780 Score = 167 bits (184), Expect = 4e-36 Identities = 360/535 (67%), Gaps = 19/535 (4%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || || || || || || |||||||| ||||| ||||| || | | | ||| | Sbjct 6746 CTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGAACGTTTCTCG 6805 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 |||||||| ||| ||| || || |||||||| ||||||||||| || ||||| Sbjct 6806 AAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAAT 6865 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | || || ||| || | || || | ||||||||| || |||| | || | Sbjct 6866 ATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGG 6925 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | || | ||||| || || |||||||| || || |||||||| Sbjct 6926 GAATATCTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTGACTGGGCC 6985 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTC-------GGCGAGAGGCTGGTAGCCTT 42715 || ||||||| |||| | ||||||| | ||| | || |||||||| Sbjct 6986 CTTCGCTGGATC------TCCGATG-AACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTT 7038 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 ||||||| || ||||| |||||||| ||| | || || |||||||| ||| | ||| | Sbjct 7039 CGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTGAAGAA 7098 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||| || ||||| ||||| ||||| ||||||||| | |||||||| | Sbjct 7099 GCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGGGCAT 7158 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGG 42894 ||| | ||||||| || || || ||| ||||| || | || |||||| || Sbjct 7159 GCACACCGACTTTGGATGTCTTCTCTTC---AGCCATCTAAAGC-GTCGCCCTCATCCGG 7214 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 | ||| | ||| ||||| || ||||| | ||||| |||| ||||| || Sbjct 7215 AAGTCGTCAAGCGCATTATCACTGATGCCGTTGCCATCGAACAGGAATTCCTTAC 7269 >seq6955 Length=16480 Score = 159 bits (176), Expect = 7e-34 Identities = 308/451 (68%), Gaps = 20/451 (4%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || || ||||| || ||||||||||| |||||||||||||||| | | || | Sbjct 8243 CTCGCATTTTTCGCGGCTTCTGACGGCATTGTCAATGAGAACCTGGTCGAGCGATTTTCG 8184 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 ||||||||||| | ||||| || ||||| |||||||| || || || |||||| Sbjct 8183 AAAGAGGTGCAAGCCGCAGAGGCACGTTGCTTTTACGGCTTTCAAATCATGATGGAGAAC 8124 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGA----TCCCGT 42595 | ||||||||| || || || |||| | || |||||| ||| ||||| Sbjct 8123 ATCCACTCTGAGACATATTCC---CTCCTCATTGATACCTACATCAAGGAACCTTCCCGG 8067 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 ||| || | | ||| | || || || || || || ||||| || ||||| || Sbjct 8066 AGAGACTACC----TTTTCGATGCAATCGAAACAATACCATGCATAAAACTCAAGGCTGA 8011 Query 42656 CTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||| | ||||| ||| || | | || |||| ||| |||| || || Sbjct 8010 CTGGGCTTTACGTTGGATATCCGACCATCGCTCC---ACCTTCGCGGAGCGGCTAGTTGC 7954 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | | || |||||||||||||| || || | || || |||||||| ||| | || Sbjct 7953 CTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGTTTGCGTCCATCTTTTGGTTAAA 7894 Query 42773 GCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGG 42832 | || || |||||| || || || ||||| || || ||||| || | || ||||| Sbjct 7893 GAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAATGAGCTCATTAGTCGTGATGAGGG 7834 Query 42833 GCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 |||| | |||||||| || || |||||| Sbjct 7833 TATGCACACTGACTTTGCGTGTCTGCTGTTC 7803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944051141131280