Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq582 123 6e-23 seq580 122 2e-22 seq4584 104 6e-17 seq6019 95.1 3e-14 seq4583 91.5 3e-13 >seq582 Length=4044 Score = 123 bits (136), Expect = 6e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| || || || ||||||||||| || | || || || || || || | Sbjct 3088 CGAGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCA 3147 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 ||| ||||| |||||||||||||| || || | ||||| || || || ||||||| Sbjct 3148 GTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 3207 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| || ||||| || |||| || || || ||||| | ||| || ||||| | Sbjct 3208 TCTTCGCCTTGACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGC 3267 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| ||||| || || |||||||| Sbjct 3268 CCGTCAGCGTCTTCACAAAGATCTGCAT 3295 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| | || | || || || | ||||| || |||||| Sbjct 3611 TCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAAG 3670 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| || || || || |||||||| || ||||| || || Sbjct 3671 ATCAGACGCTGCTG---GTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTGACA 3727 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| || || || || || || || || ||||||| |||||| Sbjct 3728 TTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTG 3787 Query 288460 ACGAATATCTGCATT 288474 ||||||||||||||| Sbjct 3788 ACGAATATCTGCATT 3802 >seq580 Length=8796 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| ||||| || || || ||||| | | Sbjct 8072 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAG 8131 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||||| || || || || |||||||| || || Sbjct 8132 AGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGA 8191 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||| || || ||||||||||| || || | || || || || Sbjct 8192 ATGCCTTCTTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACC 8251 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| ||||| ||||||||||| || ||||| Sbjct 8252 TCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 288270 ATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTG 288329 ||||| || || || || |||||||| || || | | |||||| || ||||| | || Sbjct 7867 ATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTG 7926 Query 288330 TTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTT 288389 || || || || || || || || ||| || || ||||| || ||||| || || Sbjct 7927 CTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTT 7986 Query 288390 CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| || || | ||| || || || ||||| ||||||||||| || || Sbjct 7987 GGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGT 8046 Query 288450 CAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || ||||| Sbjct 8047 AAGGGTCTTGACGAAGATTTGCAT 8070 >seq4584 Length=6343 Score = 104 bits (114), Expect = 6e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 269146 TCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGT 269205 ||| | || || ||||| || | |||||| ||||| || || || || |||||||| Sbjct 3905 TCTCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGC 3964 Query 269206 ATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATG 269265 | || ||| || || |||| || |||||||| || | |||||||||| ||| ||| Sbjct 3965 CTGCTCGTGGCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCGACTTCATG 4024 Query 269266 GAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 || | || ||||| | || ||||| ||||||||||| |||||||| Sbjct 4025 GACATGATCTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGT 4071 >seq6019 Length=9942 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/173 (73%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 269146 TCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGT 269205 ||| | || || ||||| || | |||||| ||||| || || || || || |||||| Sbjct 2373 TCTCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGT 2432 Query 269206 AT-CTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTAT 269264 | ||| || | || || | || || |||||||| || | ||| ||||||| ||| || Sbjct 2433 CTGCTTGTCGCC-CTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCAT 2491 Query 269265 GGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAA--GCGTGTCAG 269315 ||| | || |||||| | || ||||| ||||||||||| || ||||||||| Sbjct 2492 GGACATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 2544 >seq4583 Length=9780 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 269146 TCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGT 269205 ||| | || || ||||| || | |||||| ||||| || || || || || |||||| Sbjct 7343 TCTCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGT 7402 Query 269206 ATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATG 269265 | | || || || | || || |||||||| || | ||| ||||||| ||| ||| Sbjct 7403 CTGCTTGTAGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATG 7462 Query 269266 GAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAA--GCGTGTCAG 269315 || | || |||||| | || ||||| ||||||||||| || ||||||||| Sbjct 7463 GACATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 7514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179285565200234