Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4584 129 1e-24 seq6019 122 2e-22 seq4583 118 2e-21 seq6955 111 3e-19 >seq4584 Length=6343 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || |||||||||||||| | |||||| | || ||||| || || || || || ||| | Sbjct 3908 CTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGCCTG 3967 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || ||||| |||| || ||||||||||||| || ||||| | ||| ||||| Sbjct 3968 CTCGTGGCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCGACTTCATGGAC 4027 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || |||||||| || || |||||||||||||| |||||||| Sbjct 4028 ATGATCTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGT 4071 >seq6019 Length=9942 Score = 122 bits (134), Expect = 2e-22 Identities = 129/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || |||||||||||||| | |||||| | || ||||| || || || ||||| || | Sbjct 2376 CTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGTCTG 2435 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| ||||| | || || ||||||||||| | ||||||||| | ||| ||||| Sbjct 2436 CTTGTCGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGAC 2495 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAG 243728 | || ||||| || || || |||||||||||||| || ||||||||| Sbjct 2496 ATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 2544 >seq4583 Length=9780 Score = 118 bits (130), Expect = 2e-21 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || |||||||||||||| | |||||| | || ||||| || || || ||||| || | Sbjct 7346 CTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGTCTG 7405 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || ||||| | || || ||||||||||| | ||||||||| | ||| ||||| Sbjct 7406 CTTGTAGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGAC 7465 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAG 243728 | || ||||| || || || |||||||||||||| || ||||||||| Sbjct 7466 ATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCAG 7514 >seq6955 Length=16480 Score = 111 bits (122), Expect = 3e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 243544 GACGCTATTCCATGCCGG-CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGA 243602 |||||| | || || ||| || || |||||||| | |||||||| | ||||||||||| Sbjct 7664 GACGCTCTCCC-TGTCGGTCTCATAGGCATGAATGCAAAACTCATGTGTCAGTACATCGA 7606 Query 243603 ATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAA 243662 || || |||||||| || | |||| ||||| | || || ||||||||||| | || Sbjct 7605 GTTTGTTGCCGACCGTCTTCTTGTCGCCCTTGGAAACGAAAAGGTGTACAACTCAACCAA 7546 Query 243663 CCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCG 243722 ||| || | ||| ||||| | ||||| | || || || || || ||||| |||||||| Sbjct 7545 CCCGTTCGACTTCATGGATATGATTTCCTTGCAGGGCAAGACCAATTTCTTTGAAAAGCG 7486 Query 243723 TGT 243725 || Sbjct 7485 GGT 7483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102535169748050