Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq582 109 5e-19 seq580 109 5e-19 seq583 84.2 2e-11 >seq582 Length=4044 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | |||||| ||||| |||||||| || || | Sbjct 3296 ACCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGA 3355 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | ||||| ||||||||||| ||| | ||||| || ||||| || || || Sbjct 3356 GAGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGG 3415 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| || || | || || || || || Sbjct 3416 GATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAAC 3475 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || | ||||| || ||||| || || || ||||| ||||| Sbjct 3476 CTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 >seq580 Length=8796 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || ||||| ||||||||||| || | || || || | || Sbjct 8086 AAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATC 8145 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||| ||||| ||| ||||||| |||||||||||||||||||| |||||||| || Sbjct 8146 CTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTC 8205 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || | | || ||||| || || | || || | || || || | || | | Sbjct 8206 CTG-AATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAG 8264 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || |||| || || ||||| |||||||| Sbjct 8265 TCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || || |||||||| | | ||||| | ||||| |||||||| |||||| || Sbjct 7880 TCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAA 7939 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || || ||||| ||||||||||| ||||| || || ||||| || ||| || Sbjct 7940 ATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTTGGCCTTGACGTTG 7999 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| | ||||| || | || | ||||| || || | || || ||| Sbjct 8000 TCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGTAAGGGTCTTGACG 8059 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 8060 AAGATTTGCAT 8070 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || ||||| ||||||||||| || | || || || | || Sbjct 8314 AAGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATC 8373 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||| | ||||||||| || ||||||| ||||| |||||||| ||||| Sbjct 8374 TTCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGGAAT 8421 >seq583 Length=22390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| ||||| || || || ||||||||||| | || ||||| |||| || Sbjct 100 ACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCG 159 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 |||||||||||||| | ||||| || || |||||||| || || Sbjct 160 AGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGGGAT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499492389599320