Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq582 107 2e-18 seq580 93.3 4e-14 seq4584 91.5 1e-13 seq4583 86.0 6e-12 seq6019 82.4 8e-11 >seq582 Length=4044 Score = 107 bits (118), Expect = 2e-18 Identities = 147/199 (74%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCG 138477 |||||||||| ||||||||||||||| || ||| | || | ||||| || ||||| || Sbjct 3606 TTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCA-TCCTCAAGCTGTTTCCCA 3664 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TT 138535 | |||| |||||||| ||||| ||||| ||||| || || || ||| | || | || Sbjct 3665 GCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATC-CTGAATCTTCGCCTT 3723 Query 138536 TTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAG 138595 |||| || | |||||| | |||||| ||||| | || | ||||| || |||| | Sbjct 3724 GACATTG-TCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACG 3782 Query 138596 TTTTTACAAAAATCTGCAT 138614 | || || || |||||||| Sbjct 3783 TCTTGACGAATATCTGCAT 3801 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | ||||| || |||||||| ||||| Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||| || || || | | |||| ||||| || || ||||| || Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | || | | || | ||||||| ||||| || Sbjct 3417 ATCCCTTCCTTGTCT-TGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAAC 3475 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || || ||||||| || || |||||||||||||| Sbjct 3476 CTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 >seq580 Length=8796 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || |||||||||||||| | || || ||||| || ||||| || | | Sbjct 8105 GACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCA 8164 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || |||||||| ||||| ||||| || ||||||||||| ||| | || | ||| | Sbjct 8165 AAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATCTTGGCTTTCAC 8223 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||| ||||| | || | || || || ||||| || | Sbjct 8224 GTTG-TCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCT 8282 Query 138599 TTACAAAAATCTGCATG 138615 | || || || |||||| Sbjct 8283 TGACGAAGATTTGCATG 8299 >seq4584 Length=6343 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||| | || ||||||| | ||||| |||||||| || ||||| ||| | ||| Sbjct 3914 GGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGCCTGCTCGTG 3973 Query 52731 CAGCTCGGGCA-GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACAT 52789 || || | | ||| || | |||| | ||||| || || || ||| ||| || Sbjct 3974 GCCCTTGGCAATGACAAGGTG-TACAACTCCACAAATCCCTTCGACTTCATGGACATGAT 4032 Query 52790 TTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 |||||| |||||||||| ||||| ||||||||||| || Sbjct 4033 CTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGT 4071 >seq4583 Length=9780 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||| | || ||||||| | ||||| |||||||| || ||||||||| | || Sbjct 7352 GGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGTCTGCTTGT- 7410 Query 52731 CAGCTCG-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACA 52788 ||| | |||| | | ||| | |||| | || || || || || ||| ||| | Sbjct 7411 -AGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGACATGA 7469 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 | ||||| |||||||||| ||||| ||||||||||| || Sbjct 7470 TCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGT 7509 >seq6019 Length=9942 Score = 82.4 bits (90), Expect = 8e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||| | || ||||||| | ||||| |||||||| || ||||||||| | || Sbjct 2382 GGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGTCTGCTTGTC 2441 Query 52731 CAGCTCGGGCA-GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACAT 52789 || || | | ||| || | |||| | || || || || || ||| ||| || Sbjct 2442 GCCCTTGGCAACGACAAGGTG-TACAACTCAACGAACCCCTTCGACTTCATGGACATGAT 2500 Query 52790 TTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| |||||||||| ||||| ||||||||||| || Sbjct 2501 CTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGT 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496111021358160