Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq580 109 5e-19 seq582 107 2e-18 seq4583 86.0 6e-12 seq4584 82.4 7e-11 >seq580 Length=8796 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965 ||||||| | ||| ||| || || ||||||||||| || |||||| ||| || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| || || || | || | ||| |||||||||||||| || || ||||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 127026 TTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 | || ||||| |||| |||| ||| |||| | ||| || |||| ||| | ||| || Sbjct 7983 TCTTGGCCTTGACGTTG-TCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || ||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 >seq582 Length=4044 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || ||||| ||||| | || ||| ||| || || || ||||| Sbjct 3099 GTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCG 3158 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| || ||||| || || || || |||||||||||| ||| ||| |||| Sbjct 3159 GCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTG 3218 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | ||||||||| | || | || ||||| ||||| || Sbjct 3219 ACGTTG-TCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGT 3277 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 3278 CTTCACAAAGATCTGCAT 3295 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||| ||| | ||| |||||||| ||||| || || || Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || ||||| || ||||| |||| | || |||||||| || || Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || ||| ||| | | || | ||||| | ||| || Sbjct 3417 ATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACC 3476 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| || || |||||||||||||| Sbjct 3477 TCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 89.7 bits (98), Expect = 5e-13 Identities = 123/171 (72%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || ||||| || ||||| || |||||| || ||||| ||| || Sbjct 3871 ACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTC 3930 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || || ||||||| ||||| || || || || |||||||||||||| Sbjct 3931 CAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTG 3990 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGT 127074 ||| || ||||| | |||| ||||| | | ||| || |||| ||| Sbjct 3991 GATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGT 4041 >seq4583 Length=9780 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 47388 GAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAA 47447 || || || |||| ||| | | || |||||| | || | ||| | | ||||| || Sbjct 7328 GACGCCCTCCCCGTCTCTCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAG 7387 Query 47448 TTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAAT 47507 ||||||||||| || ||||| || || | |||| | ||| || | ||| Sbjct 7388 TTTGTCGCCGATCGTCTGCTTGTAGCCCTTGGCAACGACAAGGTGTACAACTCAACGAAC 7447 Query 47508 CCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGC 47567 || ||||| || ||| ||| || |||||| |||||||||| ||||| |||||||||||| Sbjct 7448 CCCTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGC 7507 Query 47568 GT 47569 || Sbjct 7508 GT 7509 >seq4584 Length=6343 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 47412 GGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTT 47471 || |||||| | || | ||| | | ||||| || ||||| || || ||||||||||| Sbjct 3914 GGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGCCTGCTCGTG 3973 Query 47472 CAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531 || || |||| | ||| || || ||||| ||||| || ||| ||| || Sbjct 3974 GCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCGACTTCATGGACATGATC 4033 Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 47569 ||||| |||||||||| ||||| ||||||||||| || Sbjct 4034 TCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGT 4071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475355754424720