Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq582 104 2e-17 seq580 87.8 2e-12 >seq582 Length=4044 Score = 104 bits (114), Expect = 2e-17 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCA 45192 ||||| || || || ||||| |||||||||||||| ||| | | || ||| |||| Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATC--TGAAAGAGTACGACCATCCTCCA 3147 Query 45193 ATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAA 45252 ||| ||||| ||| | |||| ||||||||||| || || || || || || || || | Sbjct 3148 GTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 3207 Query 45253 TTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 | || |||| || | || | ||||| || ||||||||||| | |||| || ||| Sbjct 3208 TCTTCGCCTTGA-CGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTG 3266 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| || ||||| Sbjct 3267 CCCGTCAGCGTCTTCACAAAGATCTGCAT 3295 >seq580 Length=8796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| ||||| || || | || | || |||||||| || |||||||||||||| Sbjct 8143 ATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTT 8202 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 || ||||| || ||| | || | || | |||||| || |||||||| || || |||| Sbjct 8203 GTCCTGAATCTTGGCTTTCA-CGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAA 8261 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || || || |||||||| Sbjct 8262 TAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451865322073880