Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6019 134 2e-26 seq4583 134 2e-26 seq4584 116 5e-21 seq6955 109 7e-19 seq3112 84.2 3e-11 >seq6019 Length=9942 Score = 134 bits (148), Expect = 2e-26 Identities = 336/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 2185 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 2126 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||||||| || || | | ||| |||||||||||||| || || || || ||||| Sbjct 2125 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 2066 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | |||||||| |||||| | || || || ||| | ||| | ||||| Sbjct 2065 GCTACAAGACGCTCAGCAAAG--GTGGAACGTT-CATCGGAGATCCAGCGAAGGGCCCAG 2009 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | || || | ||| || || | ||||| || || ||||| || | | | | | Sbjct 2008 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGG 1949 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 | || |||||||||||| |||| || || ||||| || ||| || | | | | Sbjct 1948 GCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 1889 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 127893 || || | ||| | | ||||| | || ||||| | ||| ||||| | | || Sbjct 1888 ATCAT-GATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAA 1830 Query 127894 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 127953 | | || |||||| || || || ||||| |||||||||| || |||| || Sbjct 1829 ACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATG 1770 Query 127954 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGA 128010 ||||| | | ||||| ||||||| || | |||||||||| ||||||||| || Sbjct 1769 AGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 1710 Query 128011 GAGATCTACCTCCTCCGCAGTCCA 128034 | || | |||||| || ||||| Sbjct 1709 CAAGTCCATCTCCTCGGCGGTCCA 1686 >seq4583 Length=9780 Score = 134 bits (148), Expect = 2e-26 Identities = 336/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 7155 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 7096 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||||||| || || | | ||| |||||||||||||| || || || || ||||| Sbjct 7095 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 7036 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | |||||||| |||||| | || || || ||| | ||| | ||||| Sbjct 7035 GCTACAAGACGCTCAGCAAAG--GTGGAACGTT-CATCGGAGATCCAGCGAAGGGCCCAG 6979 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | || || | ||| || || | ||||| || || ||||| || | | | | | Sbjct 6978 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGG 6919 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 | || |||||||||||| |||| || || ||||| || ||| || | | | | Sbjct 6918 GCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 6859 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 127893 || || | ||| | | ||||| | || ||||| | ||| ||||| | | || Sbjct 6858 ATCAT-GATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAA 6800 Query 127894 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 127953 | | || |||||| || || || ||||| |||||||||| || |||| || Sbjct 6799 ACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATG 6740 Query 127954 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGA 128010 ||||| | | ||||| ||||||| || | |||||||||| ||||||||| || Sbjct 6739 AGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 6680 Query 128011 GAGATCTACCTCCTCCGCAGTCCA 128034 | || | |||||| || ||||| Sbjct 6679 CAAGTCCATCTCCTCGGCGGTCCA 6656 >seq4584 Length=6343 Score = 116 bits (128), Expect = 5e-21 Identities = 332/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||| |||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 3717 CCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 3658 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||||||| || || | | ||| |||||||||||||| || || || || || || Sbjct 3657 TTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAG 3598 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | ||||||||||||||| | || || || ||| | ||| | | ||||| Sbjct 3597 GCTACGAGACGCTCGGCAAAG--GTGGAACGTT-CATCGGAGATCCAGTGAAGGGCCCAG 3541 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | || || | ||| || || | ||||| ||| || ||||| || | | | | | Sbjct 3540 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGG 3481 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 | || ||||||||||| | || || || ||||| || ||| || | | | | Sbjct 3480 GCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 3421 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 127893 || || | ||| | | ||||| | || ||||| | ||| || || | | || Sbjct 3420 ATCAT-GATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAA 3362 Query 127894 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 127953 | | || ||||| ||| || || || || |||||||||| || || | || Sbjct 3361 ACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAAAAAGGCGAGAACATG 3302 Query 127954 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGA 128010 || || | | ||||| || |||| || | |||||||||| ||||||||| || Sbjct 3301 AGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 3242 Query 128011 GAGATCTACCTCCTCCGCAGTCCA 128034 || || | |||||| |||||||| Sbjct 3241 CAGGTCCATCTCCTCGGCAGTCCA 3218 >seq6955 Length=16480 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||| ||||| ||||| ||||| ||||| |||||| Sbjct 7816 GCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCA 7875 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || ||||||||||| ||||| || || | ||| || ||||| |||||||| Sbjct 7876 GGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCAGAAAAGAAGATG 7935 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| ||| | || || |||| ||| ||||| || |||| Sbjct 7936 CCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGG 7975 >seq3112 Length=18921 Score = 84.2 bits (92), Expect = 3e-11 Identities = 176/261 (67%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 176730 ||| ||||||||||| || | ||||| || | | |||||||| || || || || Sbjct 3577 ATCGGTCATAATCATAAGTTGGCCATACCGTAACGACGAAACATCCTGGTACTCTTTGTT 3636 Query 176731 TTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 176785 || || | |||||||||||||||| | | || ||| | ||| |||| || || Sbjct 3637 GTGCTGCAACCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATTTG-GT 3695 Query 176786 TGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAG 176845 | || | || ||||| ||||| | || || || |||||||| | |||| || Sbjct 3696 CGTGCTTC----GCCTCGCGAACATTCAAAACTTTACCACGAAGAGGGAATATACCGAAG 3751 Query 176846 TGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 176905 | | ||| ||||| ||| |||||||| || | || || || ||||| || ||| Sbjct 3752 TTGTTACGTCCAACGACACTAAGACCAGCCTGGGCCATAGTTTTGGCTGAATCTCCTTCC 3811 Query 176906 GTCACGATGAGCGTACACTTT 176926 |||| ||| || || || ||| Sbjct 3812 GTCAAGATAAGGGTGCAGTTT 3832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613320057297480