Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq580 138 3e-27 seq582 114 3e-20 seq4313 93.3 1e-13 seq2531 93.3 1e-13 seq583 86.0 1e-11 >seq580 Length=8796 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || ||||| || || | ||||||||||| | || | ||||| Sbjct 8087 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCC 8146 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || || || ||||||||||||||||| ||| ||| |||||| ||| Sbjct 8147 TCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCC 8206 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | |||||| | || || || |||| || || ||| Sbjct 8207 TGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTC 8266 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || ||||| Sbjct 8267 TTCCCCGTCAGGGTCTTGACGAAGATTTG 8295 Score = 107 bits (118), Expect = 5e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| |||| ||||| || | ||| || | ||||||||||||||||| ||||| || Sbjct 7879 CTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAA 7938 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 || || || ||||| || ||| ||| ||||| ||||| ||||| ||| ||| Sbjct 7939 AATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTTGGCCTTGACGTT 7998 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 |||| ||| || | | || || || | |||||||||||||| || || || || || Sbjct 7999 GTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGTAAGGGTCTTGAC 8058 Query 199618 AAAAATTTG 199626 || ||||| Sbjct 8059 GAAGATTTG 8067 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| ||||| || || | ||||||||| | | ||| | |||||| Sbjct 8315 AGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCT 8374 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||| |||||| || ||||| ||||| ||||| ||||| || Sbjct 8375 TCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGG 8415 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || ||||| || ||||||||||||||||| | ||| | |||| |||||| | ||| Sbjct 8400 CTCATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTCTCTCCGACTACAACATTCAG 8341 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 |||||||| |||||||||||||| Sbjct 8340 AAAGAGTCCACTCTTCACCTTGT 8318 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| ||||| || || | || ||||| | |||||| | ||||| Sbjct 8594 AGGACAAGGTGAAGAGTGGACTCTTTCTGAATATTATAGTCGGACAAAGTGCGGCCATCC 8653 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| || ||||| || || ||||| || || Sbjct 8654 TCGAGCTGCTTTCCAGCAAAGATAAGTCGTTGCTGATCAGG 8694 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||||||||| || ||||||||| | || ||||| | |||||| |||| || || | || Sbjct 8680 ACTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTATAATATTCA 8621 Query 200994 GAAAGAGTCTACTCTTCACCTTGT 201017 ||||||||| |||||||||||||| Sbjct 8620 GAAAGAGTCCACTCTTCACCTTGT 8597 >seq582 Length=4044 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || ||||| |||||||| |||| || || || | | ||| | ||||| ||||| Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||||||||||||||| ||||| |||||||| || || || || ||||| ||| Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 3209 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| || | ||||| | | || || |||||||| || ||||| ||| Sbjct 3210 TTCGCCTTGACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCC 3269 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||| || || Sbjct 3270 GTCAGCGTCTTCACAAAGATCTG 3292 Score = 113 bits (124), Expect = 1e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| |||||||| || | ||||||||| | ||||||||| ||||| || ||||| Sbjct 3598 GTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTG 3657 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || |||||||| |||||||||||||| ||| ||| || || ||||||||||| Sbjct 3658 TTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTT 3717 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || |||||||| || || | ||| ||||||| | || Sbjct 3303 CGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTG 3362 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||||||||| ||||| ||||| || ||| Sbjct 3363 CGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCT 3422 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||||| || | ||||| | | || || || ||| Sbjct 3423 TCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAAC 3482 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || || |||||||| || Sbjct 3483 GTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTG 3520 >seq4313 Length=23148 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||||||||| || |||| ||||||||| || || | ||||| Sbjct 10881 AGGACTAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCC 10822 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || || ||||| ||||| |||||||||||||||||||| || Sbjct 10821 TCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGG 10781 >seq2531 Length=57720 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || ||||||||||| |||| |||||||||| ||| || | ||||| || ||||| Sbjct 24792 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGGCCATCCTCGAGCTG 24733 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||| || |||||||||||||| || ||||| ||| Sbjct 24732 CTTGCCAGCGAAGATGAGACGTTGTTGGTCAGGA 24699 >seq583 Length=22390 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| || || || ||||||||||| |||| |||||| |||| | ||| Sbjct 88 CGCAGACGCAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTG 147 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| |||||||||||||| || || ||||| || Sbjct 148 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGG 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178552994320001