Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq582 132 5e-26 seq583 95.1 1e-14 seq580 95.1 1e-14 >seq582 Length=4044 Score = 132 bits (146), Expect = 5e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | ||| |||||| |||||||| || || || ||||| || | || || || Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 ||||| |||||||| |||| || |||||||| | || | | |||||||||| |||| Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 3209 Query 46508 TTCTTCTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566 ||| ||||| ||| | || ||||| || || || |||| ||| ||||| ||||| Sbjct 3210 TTCGCCTTGA-CGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCC 3268 Query 46567 CGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || |||||||| ||||| Sbjct 3269 CGTCAGCGTCTTCACAAAGATCTGCAT 3295 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| | ||| | | || || ||||| || || ||||| Sbjct 3610 CTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAA 3669 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||| ||| |||||| ||||| | Sbjct 3670 GATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTGACATT 3729 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||| || || || | || |||||||| || |||| ||| || || Sbjct 3730 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGAC 3789 Query 46582 AAAGATTTGCATT 46594 || || |||||| Sbjct 3790 GAATATCTGCATT 3802 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| || ||| || || || || ||||| || || ||||| | || ||| Sbjct 3315 ACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCTTCG 3374 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | || ||||| || | ||| | | |||||||| Sbjct 3375 AGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGA 3434 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | |||||| || || || || | ||| || || || Sbjct 3435 ATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTTC 3494 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||| || ||||| || ||||| Sbjct 3495 CCAGTCAACGTCTTGACAAAAATCTGCAT 3523 >seq583 Length=22390 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | |||||| || ||||| | || |||||| ||||| ||||| || || Sbjct 82 CCTCCACGCAGACGCAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAG 141 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| |||| |||||||||||||||||||| || | || || ||||||| ||| Sbjct 142 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGGG 201 Query 46487 ACGCT 46491 | ||| Sbjct 202 ATGCT 206 >seq580 Length=8796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 46386 CCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGA 46445 ||| ||| | ||||||||||| ||||||||||| || || | ||||| | || || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 46446 GCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 46505 ||||||| ||||| || || | || ||||| |||| || | | ||||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 46506 TCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||| ||||| ||| | | | || || || ||||| || | ||||| || || Sbjct 7983 TCTTGGCCTTGA-CGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||||||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565065981091560