Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6019 239 4e-58 seq4583 239 4e-58 seq4584 233 2e-56 seq6955 224 1e-53 seq580 109 5e-19 seq2531 87.8 2e-12 seq582 86.0 6e-12 seq583 84.2 2e-11 >seq6019 Length=9942 Score = 239 bits (264), Expect = 4e-58 Identities = 383/546 (70%), Gaps = 7/546 (1%) Strand=Plus/Minus Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958 |||||||| |||| ||||||||| | | ||||| ||||| ||| || | || | Sbjct 2202 CAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 2143 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018 |||| | ||| || || || | |||||| |||| || || ||| || ||||| | || Sbjct 2142 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGC 2083 Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078 | || ||||| ||||| || || || ||||| | || |||| || || ||||| Sbjct 2082 CTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTCATCGGAGATCC 2023 Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 |||| || ||||| || || || ||||| ||| || || || |||| || | ||| | Sbjct 2022 AGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCAT-CAA-A 1965 Query 133139 AACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || | | |||| || | | ||| || ||||| ||| ||||| | || Sbjct 1964 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTC 1905 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 || || | |||||||| ||| || ||||| || ||||| || || || | ||||| Sbjct 1904 GGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTG 1845 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || |||| | |||||| ||||| ||||| |||||||||||||||||| || || || Sbjct 1844 AACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAA 1785 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTC 133373 ||| || || || || |||||| || ||||| |||||||||| || | |||||| Sbjct 1784 AAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTC 1725 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 | | ||||| |||| ||||| ||||||| ||||||| || ||||||||| ||| || Sbjct 1724 GTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTTTCTT 1665 Query 133434 GTACAT 133439 |||||| Sbjct 1664 GTACAT 1659 >seq4583 Length=9780 Score = 239 bits (264), Expect = 4e-58 Identities = 383/546 (70%), Gaps = 7/546 (1%) Strand=Plus/Minus Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958 |||||||| |||| ||||||||| | | ||||| ||||| ||| || | || | Sbjct 7172 CAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 7113 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018 |||| | ||| || || || | |||||| |||| || || ||| || ||||| | || Sbjct 7112 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGC 7053 Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078 | || ||||| ||||| || || || ||||| | || |||| || || ||||| Sbjct 7052 CTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTCATCGGAGATCC 6993 Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 |||| || ||||| || || || ||||| ||| || || || |||| || | ||| | Sbjct 6992 AGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCAT-CAA-A 6935 Query 133139 AACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || | | |||| || | | ||| || ||||| ||| ||||| | || Sbjct 6934 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTC 6875 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 || || | |||||||| ||| || ||||| || ||||| || || || | ||||| Sbjct 6874 GGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTG 6815 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || |||| | |||||| ||||| ||||| |||||||||||||||||| || || || Sbjct 6814 AACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAA 6755 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTC 133373 ||| || || || || |||||| || ||||| |||||||||| || | |||||| Sbjct 6754 AAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTC 6695 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 | | ||||| |||| ||||| ||||||| ||||||| || ||||||||| ||| || Sbjct 6694 GTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTTTCTT 6635 Query 133434 GTACAT 133439 |||||| Sbjct 6634 GTACAT 6629 >seq4584 Length=6343 Score = 233 bits (258), Expect = 2e-56 Identities = 382/546 (70%), Gaps = 7/546 (1%) Strand=Plus/Minus Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958 |||||||| |||| |||||| || | | ||||| ||||| ||| || | || | Sbjct 3734 CAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 3675 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018 |||| | ||| || || || | |||||| |||| || ||| ||| || ||||| | || Sbjct 3674 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGC 3615 Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078 | || ||||| || || || || || |||||| | || |||| || || ||||| Sbjct 3614 CTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAAGGTGGAACGTTCATCGGAGATCC 3555 Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 || | || ||||| || || || ||||| ||| || || || |||||||| | ||| | Sbjct 3554 AGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCAT-CAA-A 3497 Query 133139 AACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || | | |||| || | | ||| |||||||| ||| ||||| | || Sbjct 3496 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTC 3437 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 || || | |||||||| ||| || || || || ||||| || || || | ||||| Sbjct 3436 GGAATGAATATTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTG 3377 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||||||| | |||||| ||||| || || ||||| ||||||||||| || || || Sbjct 3376 AACTTCTTTCGAGAAACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAA 3317 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTC 133373 |||||| || || || ||| ||||| ||||| ||||| |||| || | |||||| Sbjct 3316 AAAGGCGAGAACATGAGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTC 3257 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 | | ||||| |||||||||| ||||||| | ||||| ||||| |||||| ||| || Sbjct 3256 GTGGAGATCCTTAGACAGGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTTTCTT 3197 Query 133434 GTACAT 133439 |||||| Sbjct 3196 GTACAT 3191 >seq6955 Length=16480 Score = 224 bits (248), Expect = 1e-53 Identities = 392/566 (69%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| || || |||||||| |||| ||||| || | |||||| || ||| Sbjct 7802 TGAACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGG 7861 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 |||||||| || ||||| || || || || || | |||||| |||| || || | Sbjct 7862 AGAAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATC 7921 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | |||||||||| |||||| || | || || || || || ||||| |||| |||| Sbjct 7922 CAGAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGC 7981 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | | || ||||| || | ||||| || ||||| ||| | ||| || || |||| Sbjct 7982 GATGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTT 8041 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCAC------GTAGGTGTCGA 133177 |||| || | || || | ||| |||| || |||| | | |||||| || | Sbjct 8042 CGATTGCATCGAA--AAGGTAGTCTCTC---CG-GGAAGGTTCCTTGATGTAGGTATCAA 8095 Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGC 133237 ||||| ||||| | || ||||| | ||||||||| |||||||||||||||||||| Sbjct 8096 TGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGC 8155 Query 133238 ACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGA 133297 | || ||||| | | ||||| |||| | || ||||||||||| || || ||||| | Sbjct 8156 AACGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAA 8215 Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357 ||||||| || |||||||| || || ||||| |||||| || | || || |||| Sbjct 8216 TGCCGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGT 8275 Query 133358 TCAAGC----GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAA 133413 | |||| | ||||||| ||||| | | ||||| || || ||||||| Sbjct 8276 T-AAGCTTGTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAG 8334 Query 133414 AACGACGCCTCGGCTTTTTTGTACAT 133439 || || ||||| || ||||||||||| Sbjct 8335 AAAGAAGCCTCAGCCTTTTTGTACAT 8360 >seq580 Length=8796 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || ||||| || || || || | || |||||| | | Sbjct 8298 ATGCAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATCG 8239 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | |||||||| || ||||| ||||||| Sbjct 8238 GACACCATTGACAACG-TGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCA 8180 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| || |||||||||||||| || | || || ||| |||||||| Sbjct 8179 GCAGCGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCTGACTACAA 8120 Query 38423 CATCCAAAAGGA 38434 ||| || || || Sbjct 8119 CATTCAGAAAGA 8108 >seq2531 Length=57720 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||| || |||||||| || ||||| | ||| ||||| ||||| || || | || ||| Sbjct 24695 TCCCTCCTGACCAACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCT 24754 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | | |||||||||||||| ||||| ||||||| || |||||| ||||| Sbjct 24755 TGAGTGACTACAACATCCAGAAGGAGTCGACGCTTCACTTGGTGTTGCGT 24804 >seq582 Length=4044 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| |||||||| || ||| | || || |||||||| ||| | || |||||| | | Sbjct 3802 AATGCAGATATTCGTCAAGACGTTGACCGGAAAAACCATTACCCTTGAGGTCGAGTCGTC 3743 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | || | || || | || || ||||| ||||| | ||||| Sbjct 3742 TGACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCA 3683 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || |||||||| || || | | || | ||||||||| Sbjct 3682 GCAGCGTCTGATCTTCGCTGGGAAACAGCTTGAGGATGGCAGGACTTTGTCCGACTACAA 3623 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 3622 CATTCAGAAGGA 3611 Score = 82.4 bits (90), Expect = 8e-11 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||| | || || || || || || | || || ||| || || Sbjct 3523 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCC 3464 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || || | ||||| || || || ||||||| | | Sbjct 3463 GACACTATTGATAACG-TGAAGGCGAAGATTCAAGACAAGGAAGGGAT-CCCGCCGGATC 3406 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | || ||||| ||||| || || | ||||| ||| ||||| | Sbjct 3405 AGCAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATA 3346 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || || || ||||||||||| |||| || ||| Sbjct 3345 ACATTCAGAAAGAGTCGACGCTGCATCTGGTTCTCCGT 3308 >seq583 Length=22390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| |||||||| || ||||| | ||| ||||| ||||| || |||| ||||| | Sbjct 202 TCCCGCCCGACCAACAACGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTC 143 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469 || || ||||||||||| ||||| |||| || ||| | || ||||| || | || | Sbjct 142 TCTCTGATTACAACATCCAGAAGGAGTCGACCCTTCATCTCGTCTTGCGTCTGCGTGGAG 83 Query 38470 G 38470 | Sbjct 82 G 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500020228539520