Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3333 143 3e-29 seq6473 111 2e-19 seq1905 98.7 1e-15 >seq3333 Length=34899 Score = 143 bits (158), Expect = 3e-29 Identities = 262/384 (68%), Gaps = 0/384 (0%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 ||||| || || || | || ||||| || || || |||||||| || || | || || Sbjct 8294 ATGGCAGCCTGTACAGCGGCACCGTAGGCAACAGCTTCATCGGGATTGATGCTCTTGTTG 8353 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | | | ||| || || || || || Sbjct 8354 GGCTCCTTGCCGTTGAAGAAGTCGGACACGAGCTTGACAATACGAGGAATACGAGTGGAG 8413 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || || ||||| || || |||| ||| || | ||| |||||||| || || || || Sbjct 8414 CCTCCAACCAAGACAATCTCATGCACGTTGGCTTTGTCGATCTTGGAATCACGGAGAACC 8473 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || ||||| || || | | | |||||||||||| || ||||| || ||||| ||| Sbjct 8474 TTCTCGACGGGATCGAGAGTGCTTCGGAACAAGTCCTGGCAGAGTTCTTCGAAACGGGCA 8533 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||||| ||| ||||||||||| | || ||| | | || |||||||| |||| || Sbjct 8534 CGGGTAAGGGAGGTATAGAAATCGATACCCTCGAACAGGGAGTCAATTTCGATGGAGGTC 8593 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | || || | || ||||| || || || || || || || | |||||| ||| Sbjct 8594 TGAGCGGCGGATGAGAGAGTGCGCTTGGCACGTTCGCAAGCAGTACGGAGACGACGGAGG 8653 Query 7382 GCACGCGGGTTACCGGAAATATCT 7405 || || || || ||| | |||| Sbjct 8654 GCGCGAGGATTGGAGGACAGATCT 8677 Score = 105 bits (116), Expect = 8e-18 Identities = 115/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| ||||||||| || || || ||||| ||||| || | Sbjct 9388 GTGTTGTGGGGGTTCATGGCGACTTGGTTCTTAGCGGCATCGCCGATGAGACGCTC---A 9444 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 || || | ||| | ||| ||||| || ||||| || || ||||| || || || || || Sbjct 9445 TTGTCGGAAAATGAGACATACGAGGGTGTCGTCCGGTTGCCTTGATCATTGGCGATGATC 9504 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || ||||| |||||||| ||||| || Sbjct 9505 TCAACACGATCGTTCTGCCAGACACCGACACA 9536 Score = 91.5 bits (100), Expect = 2e-13 Identities = 177/259 (68%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 6579 CTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCT 6638 |||||||||| || || || | |||||| |||||| || || ||||| | | |||| Sbjct 7796 CTTTATACTTCTCAGCCTCGTTGACCATGCGTTCAATTTCCTCCTTCGACAGACGACCCT 7855 Query 6639 TATCATTCGTAATCGTAAT-CTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACA 6697 | || || || || || || | |||| | || || | || ||| ||| ||| ||| Sbjct 7856 TGTCGTTGGTGATAGTGATTCGGTTCG-ACTTGCCAGTGGTCTTGTCTGACGCAGAGACA 7914 Query 6698 TTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGT 6757 ||||| |||||||| ||||| | |||||| | || | ||||| ||| ||| | || Sbjct 7915 TTCAAGATACCATTGGCATCGATATCGAAGGTCACCTCGATTTGAGGTACACCACGAGGG 7974 Query 6758 GCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTA 6817 || | |||||||| | | || ||| |||| |||| |||| || | | | Sbjct 7975 GCAGGAGGAATACCGGAGAGCTCGAATTTACCGAGTAGGTTGTTGTCTTTGGTGCGAGCA 8034 Query 6818 CGTTCACCTTCATAGACTT 6836 |||||||||||| | |||| Sbjct 8035 CGTTCACCTTCAAACACTT 8053 >seq6473 Length=4285 Score = 111 bits (122), Expect = 2e-19 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || || || || || || || ||| ||||||| ||| Sbjct 1387 ATCGAAATCTTCACCACCAAGATGAGTGTCACCAGCAGTGGCCAAGACCTCAAAGACACC 1328 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | | |||||||| || || |||||||| || || | | || | Sbjct 1327 ATCATCGATGGACAGGAGGGAAACATCGAAAGTTCCACCACCGAGATCGTAGACGATGAT 1268 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || || || ||||| | ||||||||| ||||| || || || || ||||| Sbjct 1267 CTGGGACTCTCCGCCT---TTCTTGTTGAGACCGTAGGCGATGGCAGCAGCAGTAGGTTC 1211 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||| |||||||| ||| | || || || |||||| | ||||| || || || || || Sbjct 1210 ATTGATAATACGGAGAACCTGGAGACCGGCGATAGTTCCGGCATCCTTGGTGGCCTGACG 1151 Query 7696 TTGCGAATCGTTAAAGT 7712 || | ||| || |||| Sbjct 1150 CTGAGCATCATTGAAGT 1134 >seq1905 Length=43037 Score = 98.7 bits (108), Expect = 1e-15 Identities = 252/381 (66%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 ||| || ||||| || || | | | ||||||||| ||||| | | | || ||||| Sbjct 26551 CTTGGCACGCTCGCAAGCACTCCTCAGACGACGAAGAGCACGGGCATCTTCTGAGATATC 26610 Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 ||| || | || ||||| | |||||| ||| || | ||| ||||| Sbjct 26611 AAGCTTTGACTTTCTCTTGAACTCATTCTTGAAGTGCTCAAGCAGGGTGTTATCAAAATC 26670 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524 |||||||||||||| || || || || || || || || |||| | || || || Sbjct 26671 CTCACCACCCAAGTGAGTGTCACCAGCAGTAGCCTTAACGGCAAACACGCCACCGCTGAT 26730 Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584 || | | || ||||| || || ||||| || || || || || | |||||| | || Sbjct 26731 ATTGAGAAGAGACACATCGAAGGTTCCACCGCCAAGATCGAAGATCAAGACGTTCTTCTC 26790 Query 7585 GTCGTCTTTGTTCT---TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 | ||| ||||| | || | ||| || || || || || ||||| |||||||| || Sbjct 26791 G--GTC-TTGTTTTGGCGGTCCAAACCATAAGCAATGGCAGCTGCCGTGGGTTCATTGAT 26847 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||| || | || || || |||| | ||||| || || || | ||||| || Sbjct 26848 GATACGCAGGACCTCCAAACCGGCGATAGCGCCGGCATCCTTGGTGGCGAGACGTTGGGA 26907 Query 7702 ATCGTTAAAGTAGGCCGGGAC 7722 ||||| ||||| || ||||| Sbjct 26908 GTCGTTGAAGTACGCGGGGAC 26928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634939060678520