Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6019 89.7 6e-13 seq4584 89.7 6e-13 seq4583 89.7 6e-13 seq4646 82.4 9e-11 seq3112 82.4 9e-11 >seq6019 Length=9942 Score = 89.7 bits (98), Expect = 6e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||||||||| || | || || || ||||| || || ||||||||||| || | Sbjct 2044 CCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGT 2103 Query 102232 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | ||| | || | |||| | |||||||| || | ||||| |||||| ||||| ||| Sbjct 2104 T-TGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAAC 2162 Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||| ||||||||||| Sbjct 2163 GAGCTCATCAGCCGTGACGAGGG 2185 >seq4584 Length=6343 Score = 89.7 bits (98), Expect = 6e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| ||| | || ||||| ||||| || || ||||||||||| | || Sbjct 3576 CCTTTGCCGAGCGTCTCGTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCTCTGGCT-CT 3634 Query 102232 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | ||| | || | |||| | |||||||| || | ||||| |||||| ||||| ||| Sbjct 3635 TTTGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAAC 3694 Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||| ||||| ||||| Sbjct 3695 GAGCTCATCAGCCGTGATGAGGG 3717 >seq4583 Length=9780 Score = 89.7 bits (98), Expect = 6e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||||||||| || | || || || ||||| || || ||||||||||| || | Sbjct 7014 CCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGT 7073 Query 102232 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | ||| | || | |||| | |||||||| || | ||||| |||||| ||||| ||| Sbjct 7074 T-TGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAAC 7132 Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||| ||||||||||| Sbjct 7133 GAGCTCATCAGCCGTGACGAGGG 7155 >seq4646 Length=10087 Score = 82.4 bits (90), Expect = 9e-11 Identities = 242/373 (65%), Gaps = 0/373 (0%) Strand=Plus/Minus Query 112603 GACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCC 112662 |||||||||| |||||| ||||||| || ||||| || || ||||| | || | Sbjct 4201 GACACCGTCCCATTGGTATCGGTGTGCAGGGTCTTGCTGACACTTTCATGGCTCTTCACA 4142 Query 112663 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 |||| ||||| || || ||| | |||| | || || || || || || | Sbjct 4141 TGCCATTCGATTCTCCTGAGGCAAAGAAGCTCAACATACAGATCTTCGAAACCATCTACC 4082 Query 112723 ACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 ||| ||||| ||||| ||| | ||| |||||||| || || || || ||||| | Sbjct 4081 ACGGTGCTCTGGAGGCTAGTGCCGAGATGGCAGAGAAGGACGGACCTTACGAAACGTGGA 4022 Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842 |||| ||| ||| |||||| ||| || || || | |||| | | | | | Sbjct 4021 TGGGTAGTCCTGCTCAACAAGGCCAGCTCCAGTTCGACCTTTGGGGCGTTAACCCATCGG 3962 Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 || || ||||||||| | | ||| | || ||| ||| || || ||| | Sbjct 3961 ATCTCTGGGACTGGGACTCGTTGAAGACAAAAATTGCCAAGACGGGCCTCCGAAACTCTT 3902 Query 112903 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 112962 | |||| || || ||||| || || || ||| ||||| | ||| |||||||||| Sbjct 3901 TGTTGACTGCCCCCATGCCCACGGCATCGACCAGCCAAATTCTCGGTTTCAATGAATGCT 3842 Query 112963 TTGAACCCTACAC 112975 |||| || || || Sbjct 3841 TTGAGCCTTATAC 3829 >seq3112 Length=18921 Score = 82.4 bits (90), Expect = 9e-11 Identities = 213/320 (67%), Gaps = 16/320 (5%) Strand=Plus/Plus Query 176764 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 176823 ||| ||||| ||||| || | |||||||| | | |||||||| || || || || Sbjct 3577 ATCGGTCATAATCATAAGTTGGCCATACCGTAACGACGAAACATCCTGGTACTCTTTGTT 3636 Query 176824 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGC 176878 || || | ||||| |||||||||| | | || ||| | ||| |||| || | Sbjct 3637 GTGCTGCAACCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATTTGGTC 3696 Query 176879 TGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAG 176938 ||| | || || ||||||||| | || |||||||||||||| | |||| || Sbjct 3697 -GTGCTTC----GCCTCGCGAACATTCAAAACTTTACCACGAAGAGGGAATATACCGAAG 3751 Query 176939 TGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCT 176998 | | || ||||| ||| ||||| || || | ||||| || ||||| || || Sbjct 3752 TTGTTACGTCCAACGACACTAAGACCAGCCTGGGCCATAGTTTTGGCTGAATCTCCTTCC 3811 Query 176999 GTCACGATGAGTGTACA---CTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCC 177055 |||| ||| || || || ||| || || || || || ||| ||||||| ||| Sbjct 3812 GTCAAGATAAGGGTGCAGTTTTTGGCA-TTTTTG--GTGCCAGCCATGTTCGCGTCAGAT 3868 Query 177056 AATTTGGGAATACCAGTAAT 177075 | ||| || | ||| ||||| Sbjct 3869 AGTTTAGGCAGACCTGTAAT 3888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620553050290160