Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6955 147 3e-30 seq519 114 2e-20 >seq6955 Length=16480 Score = 147 bits (162), Expect = 3e-30 Identities = 365/538 (68%), Gaps = 16/538 (3%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| ||| ||||||||||| ||| || |||||||| ||||| | ||| Sbjct 7834 CCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCAGGCATCAGTCCCCGCTTC 7893 Query 119574 TTTAGCCAAAAGATGGCACAAAAAC-TTCCAGAAAAGAAGATGCCCTCCACACAGGCGAA 119632 |||| ||||||||||| || |||| ||||||||||||||||||||| ||| | || || Sbjct 7894 TTTAACCAAAAGATGG-ACGCAAACGATCCAGAAAAGAAGATGCCCTCTACAGAAGCAAA 7952 Query 119633 AGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTCG---AACCACTTGAGAGCCCAGT 119688 || | ||| ||||| || ||||| ||| | |||| | ||| | |||||||| Sbjct 7953 GGCAACTAGCCGCTCCGC-GAAGGTGGAGCGATGGTCGGATATCCAACGTAAAGCCCAGT 8011 Query 119689 TGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC-A 119747 ||||| | | |||||| || | |||| ||| || |||||||| | ||| | | Sbjct 8012 CAGCCTTGAGTTTTATGCATGGTATTGTTTCGATTGCATCGAAAAGGT-AGTCTCTCCGG 8070 Query 119748 GCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT-TTC 119806 | | ||||| || || |||||||||| || || |||||| || | | | | Sbjct 8071 GAAGGTTCCTTGATGTAGGTATCAATGAGGAGGGAATATGTCTCAGAGTGGATGTTCTCC 8130 Query 119807 ATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAA 119866 || || ||| || | ||||| | || || || | |||||| || | | ||| Sbjct 8131 ATCATG-ATTTGAAAGCCGTAAAAGCAACGTGCCTCTGCGGCTTGCACCTCTTTCG-AAA 8188 Query 119867 ATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGT 119925 || | | | | || ||| ||||| || || || | ||||| ||||| | || || Sbjct 8189 ATCGCTCGACCAGGTTCTCATTGACAATGCCGTCAGAAGCCGCGAAAAATGCGAGGACGT 8248 Query 119926 ACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCATATCTTTAG 119982 ||||| | |||||||| ||||| || |||| |||||||||| || || | Sbjct 8249 GAGAGATGAAGTGATGTTCATTTTCGTTAAGCTTGTTATTCCAGTCGTAGATGTCCATTT 8308 Query 119983 ACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCA 120040 ||||||| |||||||| |||||| ||| || |||||||| || | |||||| Sbjct 8309 GTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGCCTCAGCCTTTTTGTACATTTCCCA 8366 >seq519 Length=72787 Score = 114 bits (126), Expect = 2e-20 Identities = 223/323 (69%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTT--GGTTGGCACGTGCC 11730 ||| |||| ||||||||||||||||| ||| | |||||||||| | | | || Sbjct 64176 CTTTCCGATAGCGTCAATCTCATCGACGAAGATGATACACGGTGCCGACTTTCTCGCAGA 64235 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | ||||||| ||||||||||| | |||||||| ||||||||||| ||||| || Sbjct 64236 AG--CGAAAAGGTCACGTACACGTGATGAACCAACACCCACGAACATCTCGACGAA-TTC 64292 Query 11791 GCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || | | || || | |||||| ||| | ||| |||||| | || || | | Sbjct 64293 GGAGCCGGAGACAGACAGGAAGGGCACAGATGCCTCGCCAGCGGTTGCCTTGGCCAACAA 64352 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA-- 11907 |||||||| || || |||| ||| | | || || || || ||||||||||||||| Sbjct 64353 TGTCTTACCAGTTCCTGGTGGACCTGACAAAATAGCTCCGCGAGGGATCTTGGCACCAAG 64412 Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTG 11967 |||| ||| |||||| ||| | ||| | || | |||| || || ||||| Sbjct 64413 CTTC--TCGTATTTGGCAGGCTCCTTCAAGAACTTGACGAACTCCATAACCTCTTCCTTC 64470 Query 11968 GCGGAGTCGATACCCTCAACATC 11990 || ||| |||||| | ||||| Sbjct 64471 GCTTCGTCCATACCCGCCACATC 64493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588796340233400