Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6955 104 3e-17 seq3112 87.8 2e-12 >seq6955 Length=16480 Score = 104 bits (114), Expect = 3e-17 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||||||| || ||| || ||||| ||||| || || Sbjct 7816 GCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCA 7875 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || ||||||||||| |||||| | || | |||| || || || || |||||||| Sbjct 7876 GGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCA-AACGATCCAGAAAAGAAGAT 7934 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||| ||| | ||||| |||| || ||||| ||||||| Sbjct 7935 GCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGG 7975 >seq3112 Length=18921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 177/261 (68%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 169214 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCC 169273 ||| |||||||||||||| | ||||| || | |||||||| ||||| ||||| Sbjct 3577 ATCGGTCATAATCATAAGTTGGCCATACCGTAACGACGAAACATCCTGGTACTCTTTGTT 3636 Query 169274 TTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGC 169328 || || | ||||| |||||||||| | | || ||| | ||| |||| || | Sbjct 3637 GTGCTGCAACCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATTTGGTC 3696 Query 169329 TGTGCCACTGAAGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAG 169388 |||| | || ||||| |||||| | || ||||| ||||| || | || || Sbjct 3697 -GTGCTTC----GCCTCGCGAACATTCAAAACTTTACCACGAAGAGGGAATATACCGAAG 3751 Query 169389 TGATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCC 169448 | | |||||||||||| ||||| || || | ||||| |||||||| || ||| Sbjct 3752 TTGTTACGTCCAACGACACTAAGACCAGCCTGGGCCATAGTTTTGGCTGAATCTCCTTCC 3811 Query 169449 GTGACAATGAGGGTACACTTT 169469 || | || ||||| || ||| Sbjct 3812 GTCAAGATAAGGGTGCAGTTT 3832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589800833731720