Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq580 161 2e-34 seq582 158 3e-33 seq583 95.1 3e-14 seq2531 87.8 4e-12 >seq580 Length=8796 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||||||||| ||||| ||||| || | || |||| ||||| || Sbjct 8090 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCC 8149 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || || || || || || ||||| |||||||||||||||||||| ||| Sbjct 8150 AGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGA 8209 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || ||||| |||||||||||||| || || || || |||| ||||| Sbjct 8210 ATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTC 8269 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 8270 CCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||| || || ||||||||||| | | || | |||||||| |||||| Sbjct 7868 TGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTGC 7927 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || ||||||||||| || || |||||||| ||||| ||||| || || || Sbjct 7928 TTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTTG 7987 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| || ||||| |||||| ||||| || ||||| | |||||| || || Sbjct 7988 GCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGTA 8047 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 8048 AGGGTCTTGACGAAGATTTGCAT 8070 Score = 116 bits (128), Expect = 8e-21 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||||||||| ||||| ||||| |||| ||||| | |||||||| Sbjct 8318 ACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTCC 8377 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 | |||||| |||||||| || || || |||||||| || ||||||| || Sbjct 8378 AACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGGAATGCTTT 8426 Score = 111 bits (122), Expect = 3e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||||||||| |||||||| || |||| | ||| | ||||| ||| Sbjct 8597 ACAAGGTGAAGAGTGGACTCTTTCTGAATATTATAGTCGGACAAAGTGCGGCCATCCTCG 8656 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || || |||||||||||||| || || || ||||| Sbjct 8657 AGCTGCTTTCCAGCAAAGATAAGTCGTTGCTGATCAGGGGGAAT 8700 >seq582 Length=4044 Score = 158 bits (174), Expect = 3e-33 Identities = 158/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || ||||| ||||| |||| | ||| || ||||| || ||||| Sbjct 3598 GTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTG 3657 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || |||||||| || || || |||||||||||||| || || || || ||||| || Sbjct 3658 TTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTT 3717 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || ||||||||||| || || || |||||||||| || ||||| || Sbjct 3718 CGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGT 3777 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||| || || ||||| | |||||| Sbjct 3778 CAACGTCTTGACGAATATCTGCATT 3802 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || || || |||||||| ||||| || || || | || || | |||||||| Sbjct 3314 AACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCTTC 3373 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || ||||| || || || || || ||||| |||||||| Sbjct 3374 GAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTG 3433 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| ||||| ||||| || || || || | |||| ||||| Sbjct 3434 AATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTT 3493 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 3494 CCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 >seq583 Length=22390 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || || ||||| || ||||| || || || |||||||| | ||||| | || || Sbjct 96 CAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCGTC 155 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||||||||||| || |||||||| |||||||||||||| || || |||| Sbjct 156 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGGGATGC 205 >seq2531 Length=57720 Score = 87.8 bits (96), Expect = 4e-12 Identities = 91/117 (78%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980 ||| | ||| || | |||||| || ||||| || || || ||||| || |||| || | Sbjct 24807 GAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAAG-GTAC 24749 Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||||| ||||||||||| || |||||||| || ||||||||||| ||||| |||| Sbjct 24748 GGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCAGGAGGGATGC 24692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109134705669101