Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq582 116 2e-21 seq580 93.3 3e-14 >seq582 Length=4044 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || ||||| || ||||| | || |||| ||||| || |||||||| || Sbjct 3105 TCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCGGCGAAG 3164 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| | || | ||||||||||| |||||| |||||| Sbjct 3165 ATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 3224 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || || | || ||||| || ||||| || ||||||||| Sbjct 3225 TCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTCACA 3284 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3285 AAGATCTGCATA 3296 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||||||||| || || | || |||| || ||||| || || ||||| Sbjct 3333 TCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAG 3392 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| || |||| | ||| |||||||| ||||||| || ||| Sbjct 3393 ATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTA 3452 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| || | || || || || || || | ||||| ||| Sbjct 3453 TCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACA 3512 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 3513 AAAATCTGCATA 3524 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || | | | |||| || |||||||| || || || Sbjct 3611 TCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAAG 3670 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | |||||||| || ||||||| ||||| Sbjct 3671 ATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTGACATTG 3730 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| ||||||||||| || | ||||| || Sbjct 3731 TCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGACG 3790 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 3791 AATATCTGCAT 3801 >seq580 Length=8796 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| |||||||||||||| ||||| || || |||| |||| |||||||| Sbjct 8095 GTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTG 8154 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||| || ||||| || || || |||||||| | || | || || ||||| |||||| Sbjct 8155 TTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTT 8214 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| ||| | || | || | ||| || || | || || || || ||||| Sbjct 8215 GGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGT 8274 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||| ||||| Sbjct 8275 CAGGGTCTTGACGAAGATTTGCAT 8298 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34774 CCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| || || || ||||| || || || ||||| | | || |||| |||| Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 |||| || |||||||| || ||||||||||| || | || | || |||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 34894 TCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTT 34949 |||| ||||| | | ||||| | ||| | ||| || |||| ||| || || Sbjct 7983 TCTTGGCCTTGAC----GTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTC 8038 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| || ||||| |||||| Sbjct 8039 TTACCAGTAAGGGTCTTGACGAAGATTTGCATA 8071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324537050213784