Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq6955 158 1e-33 seq4584 116 4e-21 seq6019 102 9e-17 seq4583 102 9e-17 >seq6955 Length=16480 Score = 158 bits (174), Expect = 1e-33 Identities = 383/572 (67%), Gaps = 15/572 (3%) Strand=Plus/Plus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| || ||| ||||| ||| || | ||||| || | ||| || | ||||| || Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | ||||||||||||||| | || |||||||| || || || ||||| |||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 |||||||| || || ||||| | ||||| |||||||| | || | || | | | Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTC-CGCGAAGGTGGAGCG 7982 Query 19132 TTATTATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTC 19190 | | || ||||| | ||||| |||||||| ||||| ||||| ||||| || Sbjct 7983 ATGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTC 8042 Query 19191 TATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA 19250 || | || || || || ||| | | | || ||| | ||||||| | Sbjct 8043 GATTGCATCGAAAAG----GTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGA 8098 Query 19251 --ACTGTACATTTCT--GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATC 19306 | | | || ||| || || || || || || || ||||| |||||||| || | Sbjct 8099 GGAGGGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAAC 8158 Query 19307 TTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTC 19366 ||| |||| || || || | |||||| ||||||| || ||||| || || | Sbjct 8159 GTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGC 8218 Query 19367 CATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA 19426 | ||| ||| || |||||||| | || || || || || | ||||| | |||| Sbjct 8219 CGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCAT-TTTCGTTA 8277 Query 19427 A---TG-TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAA 19482 | || ||||||| || | || || | ||| || | ||||||| | ||||| ||| Sbjct 8278 AGCTTGTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAA 8337 Query 19483 GAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 |||||||| || ||||| ||||| | |||||| Sbjct 8338 GAAGCCTCAGCCTTTTTGTACATTTCCCATAT 8369 >seq4584 Length=6343 Score = 116 bits (128), Expect = 4e-21 Identities = 351/538 (65%), Gaps = 7/538 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| || | || || | || || || || || | ||||||||||| || | || Sbjct 3717 CCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 3658 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| || || |||||||| || ||||| ||||| || ||||| || || ||||| Sbjct 3657 TTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAG 3598 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATC 19160 || || || | || || || | | | || | || ||||| | || ||||| || Sbjct 3597 GCTACGAGACGCTCGGCA-AAGGTGGAACGTTCATCGGAGATCCAGTGAAGGGCCCAGTC 3539 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||| || ||| | || || || ||||| || | || ||| ||||| | || | Sbjct 3538 AGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGGGC 3479 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||||| | |||| || || | | | || | || ||||||||||| || || Sbjct 3478 GGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCAT 3419 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 ||||| || || || || || | ||||| | | ||| ||||| | | || | Sbjct 3418 CATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAAACG 3359 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 |||||| | || || ||||| || || ||| ||| |||||||| || | ||||| Sbjct 3358 TTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAAAAAGGCGAGAACATGAGA 3299 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATCATTAATATCTTTAGATA 19456 |||||||| |||| || || || | ||||| || | | ||| ||||| | Sbjct 3298 GATAAAATGACGCTCAT-TGTCATTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACA 3240 Query 19457 AATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 || | || || | ||||| || || ||||| ||| || ||||| | ||| || Sbjct 3239 GGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTTTCTTGTACATCTGCCAGAT 3182 >seq6019 Length=9942 Score = 102 bits (112), Expect = 9e-17 Identities = 348/538 (65%), Gaps = 7/538 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 |||||||| | || || | || || || || || | ||||||||||| || | || Sbjct 2185 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 2126 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| || || |||||||| || ||||| ||||| || ||||| || || || || Sbjct 2125 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 2066 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATC 19160 || || || | || || || | | | || | || ||||| || ||||| || Sbjct 2065 GCTACAAGACGCTCAGCA-AAGGTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTC 2007 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||| || ||| | || || || ||||| | || || ||| ||||| | || | Sbjct 2006 AGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGC 1947 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||||| | || | ||| || | | | || | || ||||||||||| || || Sbjct 1946 GGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCAT 1887 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 ||||| || || || || || | ||||| | | ||| || || | | || | Sbjct 1886 CATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACG 1827 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 |||||| | ||| || || || || || || ||| |||||||| || | ||||| Sbjct 1826 TTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATGAGA 1767 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATCATTAATATCTTTAGATA 19456 || || || |||| || ||| || | ||||| || | | ||| ||||| | Sbjct 1766 GATGAAGTGACGCTCAT-TGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACA 1708 Query 19457 AATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 | || | || || | ||||| || || ||||| ||| || ||||| | ||| || Sbjct 1707 AGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTTTCTTGTACATCTGCCAGAT 1650 >seq4583 Length=9780 Score = 102 bits (112), Expect = 9e-17 Identities = 348/538 (65%), Gaps = 7/538 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 |||||||| | || || | || || || || || | ||||||||||| || | || Sbjct 7155 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 7096 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| || || |||||||| || ||||| ||||| || ||||| || || || || Sbjct 7095 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 7036 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATC 19160 || || || | || || || | | | || | || ||||| || ||||| || Sbjct 7035 GCTACAAGACGCTCAGCA-AAGGTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTC 6977 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||| || ||| | || || || ||||| | || || ||| ||||| | || | Sbjct 6976 AGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGC 6917 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||||| | || | ||| || | | | || | || ||||||||||| || || Sbjct 6916 GGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCAT 6857 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 ||||| || || || || || | ||||| | | ||| || || | | || | Sbjct 6856 CATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACG 6797 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 |||||| | ||| || || || || || || ||| |||||||| || | ||||| Sbjct 6796 TTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATGAGA 6737 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATCATTAATATCTTTAGATA 19456 || || || |||| || ||| || | ||||| || | | ||| ||||| | Sbjct 6736 GATGAAGTGACGCTCAT-TGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACA 6678 Query 19457 AATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 | || | || || | ||||| || || ||||| ||| || ||||| | ||| || Sbjct 6677 AGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTTTCTTGTACATCTGCCAGAT 6620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561937335736920