Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq580 113 4e-19 seq3333 104 2e-16 seq4744 91.5 1e-12 >seq580 Length=8796 Score = 113 bits (124), Expect = 4e-19 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 |||||||||||| || || ||||||||||| | | || | |||||| || || Sbjct 7867 ATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTG 7926 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 || |||||||||||||||| ||||||||| |||||||| ||||| || || || || || Sbjct 7927 CTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTT 7986 Query 563391 TTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAG 563449 || || || || ||||| | || | || ||||| || | || ||||||| Sbjct 7987 GGCCTTGACGTTGTCGATGGTATCCG-AAGACTCCACCTCGAGGGTGATCGTCTTACCAG 8045 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || ||||| ||||||||| Sbjct 8046 TAAGGGTCTTGACGAAGATTTGCATA 8071 >seq3333 Length=34899 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || ||| | |||||||| ||| | ||| ||||| || || | ||| |||| || Sbjct 8057 ATCCAAGTGTTTGAAGGTGAACGTGCTCGCACCAAAGACAACAACCTACTCGGTAAATTC 7998 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | | |||||||||||||| |||||||| ||||| ||||| || || || |||||| Sbjct 7997 GAGCTCTCCGGTATTCCTCCTGCCCCTCGTGGTGTACCTCAAATCGAGGTGACCTTCGAT 7938 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||||||||||| || |||||||| |||| Sbjct 7937 ATCGATGCCAATGGTATCTTGAATGTCTCTGC 7906 >seq4744 Length=20620 Score = 91.5 bits (100), Expect = 1e-12 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || || || || || ||| | ||||| || || || || |||| Sbjct 13602 ATGCTGTTGTCACTGTCCCTGCCTACTTCAACGACGCTCAACGGCAGGCAACAAAGGATG 13543 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || | || |||||| | | ||||| || | ||||||||||||||||||||||| | Sbjct 13542 CCGGTCAGATCGCTGGATTAGACGTTCTCCGAGTCATCAATGAACCTACTGCTGCTGCTC 13483 Query 550518 TTGCATATGG 550527 | |||||||| Sbjct 13482 TGGCATATGG 13473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028005459302470