Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq582 107 1e-18 seq580 82.4 6e-11 >seq582 Length=4044 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| ||||| |||||| ||||| || || ||||| || | ||| | || || Sbjct 3315 ACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCATCTTCG 3374 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| || || || || ||||||| || | || |||||||| | Sbjct 3375 AGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGA 3434 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || || | ||| ||||| | |||||| || || Sbjct 3435 ATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTTC 3494 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || |||||||||||||| Sbjct 3495 CCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || ||||| ||||| || ||| | ||| | || |||| ||||| ||||| || Sbjct 3104 CTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCGGCGAA 3163 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| || || || || | ||| | ||||||||||| ||||| || || Sbjct 3164 GATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 3223 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || | ||| || |||| |||||| || || ||||||| || || || Sbjct 3224 GTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTCAC 3283 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 3284 AAAGATCTGCAT 3295 >seq580 Length=8796 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 ||||||| || || ||||| || || ||||||||||| || | | || | || |||| Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 |||||| |||||||| || ||||| || ||||| | |||| || |||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| || || | | | || || | ||||||||| | || ||||| || | Sbjct 7983 TCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTAC 8042 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || | || || || || || ||||| Sbjct 8043 CAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380824304753169