Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6019 174 3e-38 seq4584 174 3e-38 seq4583 174 3e-38 seq6955 143 5e-29 >seq6019 Length=9942 Score = 174 bits (192), Expect = 3e-38 Identities = 370/547 (68%), Gaps = 9/547 (2%) Strand=Plus/Minus Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| |||||| ||| ||||| |||||||||||| |||| ||||| |||||||| Sbjct 2202 CAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 2143 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || | ||| || || | || || |||||||||||||| |||| Sbjct 2142 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGC 2083 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA--AGAAGCGTTCTTGTCTGAGAT 48312 | || || || ||||| || || | ||| | || | | ||||| || ||||| Sbjct 2082 CTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTC--ATCGGAGAT 2025 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| ||| |||||||| || || |||||||| || || ||||| | || || Sbjct 2024 CCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAA 1965 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 || | | | || | | ||| | || ||| || || | || |||| Sbjct 1964 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTC 1905 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 || || | |||||| || ||||||||| || |||||| | || ||| ||||| Sbjct 1904 GGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTG 1845 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || ||| | ||||| | || | |||||||| ||||| || || || ||||||||||| Sbjct 1844 AACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAA 1785 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCC 48609 || || |||||||| | ||| || ||||| |||| | | | | |||||| | Sbjct 1784 AAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTC 1725 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG-CGAGTGCTTTTT 48668 || | || || || ||||| || || | |||||||| |||| | ||| ||| | Sbjct 1724 GTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTG-TTTCT 1666 Query 48669 TGTACAT 48675 ||||||| Sbjct 1665 TGTACAT 1659 >seq4584 Length=6343 Score = 174 bits (192), Expect = 3e-38 Identities = 370/547 (68%), Gaps = 9/547 (2%) Strand=Plus/Minus Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| |||||| ||| || || |||||||||||| |||| ||||| |||||||| Sbjct 3734 CAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 3675 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || | ||| || || | || ||||||||||||||||| |||| Sbjct 3674 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGC 3615 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA--AGAAGCGTTCTTGTCTGAGAT 48312 | || || || || || || ||| | ||| | || | | ||||| || ||||| Sbjct 3614 CTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAAGGTGGAACGTTC--ATCGGAGAT 3557 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| ||| |||||||| || || |||||||| || || ||||| ||||| || Sbjct 3556 CCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAA 3497 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 || | | | || | | ||| | || || || || | || |||| Sbjct 3496 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTC 3437 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 || || | |||||| || ||||||||| || |||||| | || ||| ||||| Sbjct 3436 GGAATGAATATTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTG 3377 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 |||||| | ||||| | || | || ||||| || || || || || ||||||||||| Sbjct 3376 AACTTCTTTCGAGAAACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAA 3317 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCC 48609 ||||| || ||||| | ||||| ||||| |||| | | | |||||| | Sbjct 3316 AAAGGCGAGAACATGAGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTC 3257 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG-CGAGTGCTTTTT 48668 || | || || |||||||| || || |||||||||| || | | ||| ||| | Sbjct 3256 GTGGAGATCCTTAGACAGGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTG-TTTCT 3198 Query 48669 TGTACAT 48675 ||||||| Sbjct 3197 TGTACAT 3191 >seq4583 Length=9780 Score = 174 bits (192), Expect = 3e-38 Identities = 370/547 (68%), Gaps = 9/547 (2%) Strand=Plus/Minus Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| |||||| ||| ||||| |||||||||||| |||| ||||| |||||||| Sbjct 7172 CAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAG 7113 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || | ||| || || | || || |||||||||||||| |||| Sbjct 7112 GCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGC 7053 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA--AGAAGCGTTCTTGTCTGAGAT 48312 | || || || ||||| || || | ||| | || | | ||||| || ||||| Sbjct 7052 CTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTC--ATCGGAGAT 6995 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| ||| |||||||| || || |||||||| || || ||||| | || || Sbjct 6994 CCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAA 6935 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 || | | | || | | ||| | || ||| || || | || |||| Sbjct 6934 AAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTC 6875 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 || || | |||||| || ||||||||| || |||||| | || ||| ||||| Sbjct 6874 GGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTG 6815 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || ||| | ||||| | || | |||||||| ||||| || || || ||||||||||| Sbjct 6814 AACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAA 6755 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCC 48609 || || |||||||| | ||| || ||||| |||| | | | | |||||| | Sbjct 6754 AAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTC 6695 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG-CGAGTGCTTTTT 48668 || | || || || ||||| || || | |||||||| |||| | ||| ||| | Sbjct 6694 GTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTG-TTTCT 6636 Query 48669 TGTACAT 48675 ||||||| Sbjct 6635 TGTACAT 6629 >seq6955 Length=16480 Score = 143 bits (158), Expect = 5e-29 Identities = 380/574 (66%), Gaps = 25/574 (4%) Strand=Plus/Plus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| || |||||||| |||||| || || || || || |||||| | |||||||| Sbjct 7807 AGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAA 7866 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 ||||||||||| | |||| || || | ||| || || | ||| || || ||||| Sbjct 7867 GTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCAGAA 7926 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||||||||| || | || || || |||| ||| |||| | | | | | Sbjct 7927 AAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGATGG 7986 Query 48305 TCTGAGATCCA--GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 || || ||||| | ||| |||||||| ||||| || |||||||| || || || | Sbjct 7987 TCGGATATCCAACGTAAA--GCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCGA 8044 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACC----TGCGTCCGCAACATAGGT---AGTGAGC 48415 | || ||| || | | ||| || | ||| | ||||| | |||| Sbjct 8045 TTGCATCGAAAAGGTAGT----CTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGG 8100 Query 48416 AGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCC 48475 || | || |||||||||| | ||||| || ||| || || ||||| ||| Sbjct 8101 AG---GGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAA 8157 Query 48476 CTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATC 48535 | ||||| | ||||| ||| | || |||| ||| | ||| ||||||||||| || Sbjct 8158 CGTGCCTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATG 8217 Query 48536 CCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTG 48595 || || ||||| || || || || ||||| || | ||| || | || || | | | Sbjct 8218 CCGTCAGAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTA 8277 Query 48596 AG---AGCATTCCAGCCCTGTACGTC--TTTGCCCAGGTCCACTTCTTCCACAGTCCAGA 48650 || ||||||| | | | ||| |||| | ||||| |||||| | ||||||| Sbjct 8278 AGCTTGTTATTCCAGTCGTAGATGTCCATTTG--TAAGTCCATTTCTTCAGCGGTCCAGA 8335 Query 48651 AGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | || || || ||||||||||| ||||||| Sbjct 8336 AAGAAGCCTCAGCCTTTTTGTACATTTCCCATAT 8369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931248647563520