Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6955 104 3e-17 seq3112 95.1 1e-14 >seq6955 Length=16480 Score = 104 bits (114), Expect = 3e-17 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 ||||||| ||||| || |||| ||||| | ||| ||||| |||||||| || || || | Sbjct 7975 CCTTCGCGGAGCGGCTAGTTGCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGT 7916 Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | |||| | || | |||||| ||||||||||| || ||||| || || ||||| ||| Sbjct 7915 T-TGCGTCCATCTTTTGGTTAAAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAAT 7857 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || ||| || ||||||||| | ||| || ||||| Sbjct 7856 GAGCTCATTAGTCGTGATGAGGGTATGCACACTGACTTTGC 7816 >seq3112 Length=18921 Score = 95.1 bits (104), Expect = 1e-14 Identities = 212/317 (67%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 13547 ATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG 13606 ||||| ||| | || || | ||||||||||| ||| || || | | | ||| Sbjct 3888 ATTACAGGTCTGCCTAAACTATCTGACGCGAACATGGCTGGCACCAAAAATGCCAAAAAC 3829 Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCT 13666 || || || || | || || || ||||| || ||||| | || || ||||| | Sbjct 3828 TGCACCCTTATCTTGACGGAAGGAGATTCAGCCAAAACTATGGCCCAGGCTGGTCTTAGT 3769 Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGG 13726 |||||||| ||| | ||| |||| | ||||| ||||| |||||| | ||||||||| Sbjct 3768 GTCGTTGGACGTAACAACTTCGGTATATTCCCTCTTCGTGGTAAAGTTTTGAATGTTCGC 3709 Query 13727 GACGCTTCGGTGGCACAGCTCACATCA-----AACCAGGAGTTCAACGATCTCAAGAAGA 13781 || || | |||| | || |||| ||| ||||| || | | ||||||||| Sbjct 3708 GAGGC----GAAGCAC-GACCAAATCATGAAGAACGAGGAGATCCAGAACATCAAGAAGA 3654 Query 13782 TCCTTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTC 13841 | | || | || || ||||| ||||| |||||||| | || ||||| | | Sbjct 3653 TTTTGGGGTTGCAGCACAACAAAGAGTACCAGGATGTTTCGTCGTTACGGTATGGCCAAC 3594 Query 13842 TTATGATTATGACAGAT 13858 ||||||||||||| ||| Sbjct 3593 TTATGATTATGACCGAT 3577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596387623900640