Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4584 134 4e-26 seq6019 116 1e-20 seq4583 116 1e-20 seq4646 89.7 2e-12 >seq4584 Length=6343 Score = 134 bits (148), Expect = 4e-26 Identities = 307/451 (68%), Gaps = 12/451 (3%) Strand=Plus/Plus Query 133211 CATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAA 133269 |||||||| ||| ||| || | || ||||||||||| ||| || || ||| || || Sbjct 3290 CATTTTATCTCTCATG-TTCTCGCCTTTTTTGCTGCTTCTGACGGCATCGTTAACGAGAA 3348 Query 133270 TTTAG--GAACACGGTTTATGGGA-GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGG 133326 | | |||| |||| | | | |||||||| | || ||||| ||| ||| ||||| Sbjct 3349 CCTCGTCGAAC---GTTTCTCGAAAGAAGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGG 3405 Query 133327 GCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTA 133386 | ||||| |||||| ||||| ||||| || |||||| || || || || || Sbjct 3406 TTTCCAGATCATGATGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGACACATA 3465 Query 133387 CATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTA 133445 ||||||||| ||| ||||| | | | || || | |||| | | || ||||||| | Sbjct 3466 CATCAAAGACCCCGCCCAGAGGGAATATCTTTTTGATGCCA-TCGAGACCATTCCTTGCA 3524 Query 133446 TTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTA 133505 | ||| ||| |||||||||| || | |||||| || | ||| | | ||||| Sbjct 3525 TCAAACGCAAAGCTGACTGGGCCCTTCACTGGATCTCCGATGAACGTTCCACCTTTGCCG 3584 Query 133506 CTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCT 133564 |||||||| || ||||| | || || |||||||| ||| ||| | || ||| || Sbjct 3585 AGCGTCTCGTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTC-TTTTGCTTCC 3643 Query 133565 ATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATT 133624 || |||||| | || |||||||| | | ||||| || || || ||||| || || Sbjct 3644 ATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATC 3703 Query 133625 TCAAGGGACGAGGCACTTCACACCGAATTTG 133655 | || |||| | |||||||| |||| Sbjct 3704 AGCCGTGATGAGGGCATGCACACCGACTTTG 3734 >seq6019 Length=9942 Score = 116 bits (128), Expect = 1e-20 Identities = 249/367 (68%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 133291 AGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||| ||||| | || ||||| ||| ||| ||||| | ||||| |||||| ||||| Sbjct 1838 AGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAATAT 1897 Query 133351 CCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA 133410 ||||| || |||||| || || ||||| ||||||||||| ||| ||||| | | Sbjct 1898 TCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGGGA 1957 Query 133411 CAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTA 133469 | || || | | | | | || ||||||| || ||| ||| |||||||||| Sbjct 1958 ATATCTTTTTGATG-CTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTGACTGGGCCC 2016 Query 133470 TTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAG 133529 || |||||| || | ||| | | |||||| ||||| || || || || | | Sbjct 2017 TTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCG 2076 Query 133530 TAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGT 133588 | || |||||||| ||| ||| |||| ||| || || |||||| | || |||||||| Sbjct 2077 TTGAAGGCATTTTCTTCTCTGGCTCGTT-TGCTTCCATCTTTTGGTTGAAGAAGCGTGGC 2135 Query 133589 ATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACC 133648 | | ||||| || || || ||||| || || | ||||||| | |||||| Sbjct 2136 TTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGGGCATGCACACC 2195 Query 133649 GAATTTG 133655 || |||| Sbjct 2196 GACTTTG 2202 >seq4583 Length=9780 Score = 116 bits (128), Expect = 1e-20 Identities = 249/367 (68%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 133291 AGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||| ||||| | || ||||| ||| ||| ||||| | ||||| |||||| ||||| Sbjct 6808 AGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAATAT 6867 Query 133351 CCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA 133410 ||||| || |||||| || || ||||| ||||||||||| ||| ||||| | | Sbjct 6868 TCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGGGA 6927 Query 133411 CAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTA 133469 | || || | | | | | || ||||||| || ||| ||| |||||||||| Sbjct 6928 ATATCTTTTTGATG-CTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTGACTGGGCCC 6986 Query 133470 TTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAG 133529 || |||||| || | ||| | | |||||| ||||| || || || || | | Sbjct 6987 TTCGCTGGATCTCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCG 7046 Query 133530 TAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGT 133588 | || |||||||| ||| ||| |||| ||| || || |||||| | || |||||||| Sbjct 7047 TTGAAGGCATTTTCTTCTCTGGCTCGTT-TGCTTCCATCTTTTGGTTGAAGAAGCGTGGC 7105 Query 133589 ATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACC 133648 | | ||||| || || || ||||| || || | ||||||| | |||||| Sbjct 7106 TTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGGGCATGCACACC 7165 Query 133649 GAATTTG 133655 || |||| Sbjct 7166 GACTTTG 7172 >seq4646 Length=10087 Score = 89.7 bits (98), Expect = 2e-12 Identities = 221/333 (66%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 |||| ||||||||| || ||||||||||| | | || ||| ||||| | Sbjct 5068 CGAATATTATGAATGCTGAGACCAATACCACCGGCCGTCTTGCTAATCATGGCGCAGCTC 5127 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | || | | | || ||||| || ||||| || | ||| | | || |||| || Sbjct 5128 TTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGGAAGCAAGAT 5187 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | ||||| | ||||| ||||||||||||| || || | || || |||| ||| Sbjct 5188 GAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGCGTAAAGTAC 5247 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 | |||||| || ||||||||| | |||| || | || |||| | | Sbjct 5248 CGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATATCATTACCATGAACGCCG 5307 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCAC-TCCATCAATTCGCAG 156463 | | || | ||| |||||||||||||||||| ||| ||| ||||| | || || Sbjct 5308 ACGGCTACACGCATTATCATATGCTGAGGACGCTCAGCAA-CACGTCCATTGAGACGAAG 5366 Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 |||||||| ||||||| ||| ||||| || || Sbjct 5367 AAGGTATGATCGTTCCAAAGTCTTAAAACCAAA 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471357416449811