Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq582 116 3e-21 seq580 107 2e-18 >seq582 Length=4044 Score = 116 bits (128), Expect = 3e-21 Identities = 102/126 (81%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || || || || || || ||||| || |||||||||||||||||| Sbjct 3996 AAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAACAGCGCTTGATCTTTGCCGGGAAA 3937 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 |||||||| ||| | | | |||| |||||||||||||| ||||| || || || || Sbjct 3936 CAGCTGGAAGATGGCCGCACCCTGTCCGATTATAACATTCAGAAGGAGTCAACCCTCCAT 3877 Query 24907 CTTGGT 24912 |||||| Sbjct 3876 CTTGGT 3871 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || |||||| | ||||| || || | Sbjct 3295 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACCATTACGTTGGAAGTCGAGTCCTCT 3236 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 3235 GACACTATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 3176 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| ||||||| ||||| || || ||||||||| | | | ||||||||||| Sbjct 3175 CAACGTCTGATCTTCGCCGGAAAGCAACTGGAGGATGGTCGTACTCTTTCAGATTATAAT 3116 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 3115 ATCCAGAAGGAGTCTACTCTTCA 3093 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || ||| | || || || ||||||||| | || || || || || Sbjct 3523 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCC 3464 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || ||||| Sbjct 3463 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGGATCCCGCCGGATCAG 3404 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || ||||| || ||| | | | || || |||||| Sbjct 3403 CAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATAAC 3344 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || ||||| || || |||| | || | ||||| || Sbjct 3343 ATTCAGAAAGAGTCGACGCTGCATCTGGTTCTCCGTCTTCGCGGTGG 3297 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||| | ||||| ||||| ||||| || || || || | | Sbjct 3801 ATGCAGATATTCGTCAAGACGTTGACCGGAAAAACCATTACCCTTGAGGTCGAGTCGTCT 3742 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || ||||| || || Sbjct 3741 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 3682 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || ||||||||||| |||||| || | |||| || || ||| Sbjct 3681 CAGCGTCTGATCTTCGCTGGGAAACAGCTTGAGGATGGCAGGACTTTGTCCGACTACAAC 3622 Query 24884 ATTCAAAAGGAATCGACACTACACTT 24909 ||||| ||||| || || || ||||| Sbjct 3621 ATTCAGAAGGAGTCAACTCTTCACTT 3596 >seq580 Length=8796 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || |||||||| || || || || | | Sbjct 8298 ATGCAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATCG 8239 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || ||||||||||| || |||||||| || Sbjct 8238 GACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 8179 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || ||||||||||||||| ||| | || || || ||| Sbjct 8178 CAGCGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCTGACTACAAC 8119 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| || || || || || ||| Sbjct 8118 ATTCAGAAAGAGTCCACCCTTCAC 8095 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || ||||| || || || ||||| || || | | Sbjct 8070 ATGCAAATCTTCGTCAAGACCCTTACTGGTAAGACGATCACCCTCGAGGTGGAGTCTTCG 8011 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 8010 GATACCATCGACAACGTCAAGGCCAAGATACAGGACAAGGAAGGTATTCCTCCCGATCAG 7951 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | || ||||||||||| |||||||| ||| | | |||| ||||| || Sbjct 7950 CAACGACTTATTTTTGCCGGGAAGCAGCTGGAAGATGGCCGCACGTTGTCGGATTACAAT 7891 Query 24884 ATTCAAAAGGA 24894 || || ||||| Sbjct 7890 ATCCAGAAGGA 7880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449760364360840