Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4584 145 1e-28 seq4583 113 7e-19 seq6019 107 3e-17 >seq4584 Length=6343 Score = 145 bits (160), Expect = 1e-28 Identities = 207/291 (71%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 ||| || ||||| | ||| |||||||| | ||||||||||| | ||| ||| ||||| Sbjct 3682 GAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAA 3623 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 || ||||| || |||||||||||| | ||||| ||||||||||| ||| | || Sbjct 3622 GAAAATGCCTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAAGGTG---GAACGTTC 3566 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | |||||| | | ||||| || || || | | | || | || ||||| Sbjct 3565 ATCGGAGATCCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGAT 3506 Query 794556 GGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 ||| ||| || | ||| ||| | | ||||| |||| ||| |||||||| ||||| || Sbjct 3505 GGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGA 3446 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||||| || || || || || || ||||||||| ||||| ||||| Sbjct 3445 ATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAACCATAGAAGCA 3395 Score = 86.0 bits (94), Expect = 1e-10 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 793916 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 793975 ||| ||| |||||| ||||| |||||||||| |||||||||| ||||| | ||| Sbjct 4072 CACACGCTTCTCGAAGAAGTTAGTCTTGCCCTGAAGCGAGATCATGTCCATGAAGTCGAA 4013 Query 793976 CGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGAC 794035 || || | | ||| ||| || || || | | | |||||||| || || || Sbjct 4012 GGGATTTGTGGAGTTGTACACCTTGTCATTGCCAAGGGCCACGAGCAGGCGATCAGCAAC 3953 Query 794036 GAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAG 794080 || |||||||| ||||||||||| || ||||||||| ||||| Sbjct 3952 AAACTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAATGAG 3908 >seq4583 Length=9780 Score = 113 bits (124), Expect = 7e-19 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 793916 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 793975 ||||||| |||||| ||||| |||||||||| ||||||||||| ||||| | ||| Sbjct 7510 CACGCGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 7451 Query 793976 CGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGAC 794035 ||||| | | ||| ||| ||| || || | ||||||| || |||||||| Sbjct 7450 GGGGTTCGTTGAGTTGTACACCTTGTCGTTGCCAAGGGCTACAAGCAGACGATCGGCGAC 7391 Query 794036 GAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAG 794092 || |||||||| ||||||||||| || ||||||||| ||||| | ||||| || Sbjct 7390 AAACTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAATGAGAGAGACGGGGAG 7334 >seq6019 Length=9942 Score = 107 bits (118), Expect = 3e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 793916 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 793975 ||||||| |||||| ||||| |||||||||| ||||||||||| ||||| | ||| Sbjct 2540 CACGCGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 2481 Query 793976 CGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGAC 794035 ||||| | | ||| ||| ||| || || | ||||||| || ||||| || Sbjct 2480 GGGGTTCGTTGAGTTGTACACCTTGTCGTTGCCAAGGGCGACAAGCAGACGATCGGCAAC 2421 Query 794036 GAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAG 794092 || |||||||| ||||||||||| || ||||||||| ||||| | ||||| || Sbjct 2420 AAACTCAATGTATTGGCACATGAGCTTGGAGTTCATGCCAATGAGAGAGACGGGGAG 2364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913650541587917