Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq582 127 2e-24 seq580 87.8 1e-12 >seq582 Length=4044 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| ||||| || ||||| ||||||||||| || | | |||||| Sbjct 3308 ACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACC 3367 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||||||| | || | | ||||||||||||||| || || || || Sbjct 3368 ATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTT 3427 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || || | || | |||||| || || || || | || | Sbjct 3428 GTCTTG-AATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAA 3486 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || ||||| || || || ||||| |||||||| Sbjct 3487 TAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 29581 AAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGT 29640 || ||||| || || || || |||||||| || || | | || | ||| || || Sbjct 3596 AAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGC 3655 Query 29641 TGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAAT 29700 ||||| ||||| | |||| | ||||| || || ||||||||||| || || || ||| Sbjct 3656 TGTTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTG-AAT 3714 Query 29701 TTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCC 29759 || | |||||| | || | |||||||| || || ||||| || || ||||| || Sbjct 3715 CTTCGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCC 3774 Query 29760 AGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || |||||||||||| Sbjct 3775 GGTCAACGTCTTGACGAATATCTGCATT 3802 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 29578 ACCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||||| ||| || || || || || |||||||||||||| | | |||||| ||| || Sbjct 3871 ACCAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTC 3930 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 || ||||| || ||| | ||||| | || || || || ||||| ||||| |||||||| Sbjct 3931 CAGCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTG 3990 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAA 29730 | || |||||| | || | |||||||||| Sbjct 3991 GATCTTGGCCTTGACATTGTCGATAGTGTCAGAA 4024 >seq580 Length=8796 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| ||||| |||||||| || || | | || || Sbjct 8083 ACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCC 8142 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||||||| | || | | ||||| || || ||||| || ||||| Sbjct 8143 ATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTT 8202 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||| || | || | ||||| || || || || || || | Sbjct 8203 GTCCTG-AATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAA 8261 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | ||| || || || || ||||| Sbjct 8262 TAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385104631355823