Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3333 154 1e-31 >seq3333 Length=34899 Score = 154 bits (170), Expect = 1e-31 Identities = 264/378 (70%), Gaps = 4/378 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || ||||| ||||| ||||| | || | || | |||||| | ||| Sbjct 8767 ACGAGACGGTTGTCGAAATCCTCACCGCCCAAGTGGGTGTCACCAGCGGTAGCTTTAACT 8826 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||||| || ||||| | | |||||||| ||||| |||||| ||||| | ||| Sbjct 8827 TCGAAAATACCCTCTTCGATGGTCAAAAGAGACACATCGAAGGTTCCTCCACCGAGATCG 8886 Query 282302 AAAATAAGTACATTCATTTCTTT-GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGC 282360 ||||| || ||||| ||| ||| || || ||||||||||| |||| |||||| Sbjct 8887 AAAATGAGGACATTGCGTTCACCAGTCACC-TTCTTGTCAAGACCATAGGCAATAGCAGC 8945 Query 282361 AGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 282420 ||| ||||| || || || || | | || || | |||| ||| |||| || || || Sbjct 8946 AGCCGTTGGCTCGTTGATGATACGGAGGACGTTCATGCCAGAAATGGTTCCAGCGTCCTT 9005 Query 282421 AGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || |||| ||| ||||| || || ||||||||||| || | |||||| | |||| Sbjct 9006 GGTAGCCTGTCGTTGAGAATCATTGAAGTATGCAGGAACGGTTACAACGGCGT-TGTTGA 9064 Query 282481 TTCT-TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAA 282539 | | | || | ||| | |||||||| ||||| || | | ||| || |||| Sbjct 9065 TGGTAGTACCGAGATAGGACTCTGCTGTTTCCTTCATCTTCAAAAGGACCATGGAAGAAA 9124 Query 282540 TTTGTTCTGGAGAATATT 282557 ||| ||| || || |||| Sbjct 9125 TTTCTTCAGGGGACTATT 9142 Score = 105 bits (116), Expect = 5e-17 Identities = 235/349 (67%), Gaps = 4/349 (1%) Strand=Plus/Plus Query 281756 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 281815 ||||| || || || | ||| ||||| || |||||||||||||| ||||| | | | Sbjct 8291 AGAATGGCAGCCTGTACAGCGGCACCGTAGGCAACAGCTTCATCGGGATTGATGCTCTTG 8350 Query 281816 TTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAG 281873 || | | || || ||||| || | || | || ||| | ||| ||||||||||| Sbjct 8351 TTGGGCTCCTTGCCGTTGAAGAAGTCGGACACGAGCTTGACAATACG--AGGAATACGAG 8408 Query 281874 ATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATA 281933 || |||||||| || ||||| |||||||| | | ||| || | || ||||| | Sbjct 8409 TGGAGCCTCCAACCAAGACAATCTCATGCACGTTGGCTTTGTCGATCTTGGAATCACGGA 8468 Query 281934 AAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATT 281993 ||| || || ||||| || ||| || |||||||| || ||||||||||| Sbjct 8469 GAACCTTCTCGACGGGATCGAGAGTGCTTCGGAACAAGTCCTGGCAGAGTTCTTCGAAAC 8528 Query 281994 TAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCG 282053 || | ||||| | | || |||| || || ||||||| || |||| ||| || | Sbjct 8529 GGGCACGGGTAAGGGAGGTATAGAAATCGATACCCTCGAACAGGGAGTCAATTTCGATGG 8588 Query 282054 TAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 || |||| | || || || | || || |||||||| || || || Sbjct 8589 AGGTCTGAGCGGCGGATGAGAGAGTGCGCTTGGCACGTTCGCAAGCAGT 8637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739432315827078