Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq580 100 3e-16 seq582 98.7 1e-15 >seq580 Length=8796 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||| ||||| ||||||||||| || |||| | | | || || || Sbjct 7865 AAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCA-TCTTCCAG 7923 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| || || ||||| |||||||| || ||||||||||| || Sbjct 7924 CTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTAT 7983 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || || | | |||||| |||| ||||| || || || Sbjct 7984 CTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACC 8043 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || ||||| Sbjct 8044 AGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | || | | | ||||| ||||| |||| Sbjct 8101 GGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCA-TCCTCCAGCTGTTTGC 8159 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || ||||||| ||||||||||||||||| |||||||| ||||| ||||| | Sbjct 8160 CAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTGGCTT 8219 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | | ||| || || | || | || || || ||||| | Sbjct 8220 TCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGG 8279 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| || |||||| Sbjct 8280 TCTTGACGAAGATTTGCATG 8299 >seq582 Length=4044 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || || || || | |||| ||| | || |||||||||||||| Sbjct 3327 GTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTGCGACCA-TCTTCGAGCTGCTTGCC 3385 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || ||||| || || ||||| ||||||||||| ||||| ||| Sbjct 3386 AGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGAATCTTCGCCTT 3445 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| || ||| || || | || | || || || |||| || Sbjct 3446 CACGTTATCAATAGTGTCGGAGGACTCAACCTCTAACGTAATAGTCTTCCCAGTCAACGT 3505 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 3506 CTTGACAAAAATCTGCAT 3523 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 || ||||| ||||| || ||||| ||| || || || | | ||||| ||||| || Sbjct 3605 GTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTG--CCA-TCCTCAAGCTGTTTC 3661 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||| ||||| || || ||||| || ||||| | Sbjct 3662 CCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCC 3721 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | | ||| || || | ||| | |||||| ||||||| Sbjct 3722 TTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAAC 3781 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 3782 GTCTTGACGAATATCTGCAT 3801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483273338527720