Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq580 105 2e-17 seq582 96.9 8e-15 >seq580 Length=8796 Score = 105 bits (116), Expect = 2e-17 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||||||||| | ||||||||| | |||||| | ||||| || Sbjct 8597 ACAAGGTGAAGAGTGGACTCTTTCTGAATATTATAGTCGGACAAAGTGCGGCCATCCTCG 8656 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||| || |||||||| ||||| ||| Sbjct 8657 AGCTGCTTTCCAGCAAAGATAAGTCGTTGCTGA 8689 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| |||||||||| || ||||||||| | || ||||| | |||||| |||| || || Sbjct 8685 CAACGACTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTATAAT 8626 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | ||||||||||| |||||||||||||| Sbjct 8625 ATTCAGAAAGAGTCCACTCTTCACCTTGT 8597 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 206296 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 206355 || || ||||| || ||||||||||||||||| | ||| | |||| |||||| | ||| Sbjct 8400 CTCATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTCTCTCCGACTACAACATTCAG 8341 Query 206356 AAAGAGTCTACTCTTCACCTTGT 206378 |||||||| |||||||||||||| Sbjct 8340 AAAGAGTCCACTCTTCACCTTGT 8318 >seq582 Length=4044 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || || || || || |||||||| || |||||| Sbjct 3292 CAGATCTTTGTGAAGACGCTGACGGGCAAGACCATTACGTTGGAAGTCGAGTCCTCTGAC 3233 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || || || ||| ||| Sbjct 3232 ACTATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAA 3173 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||||||||| |||| ||||| | ||| | | ||||| || || Sbjct 3172 CGTCTGATCTTCGCCGGAAAGCAACTGGAGGATGGTCGTACTCTTTCAGATTATAATATC 3113 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||| |||||||||||||| || Sbjct 3112 CAGAAGGAGTCTACTCTTCATCT 3090 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 204767 AGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGC 204826 || |||||||||||||| ||||||| |||||| || | | ||| | ||||| ||||| Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 204827 TGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||||| || ||||| || Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTG 3178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181451287846163