Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq582 107 2e-18 seq580 100 3e-16 >seq582 Length=4044 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| ||| || | | || || ||||| || || || || Sbjct 3610 CTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAA 3669 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| | |||||| ||| ||||| ||| | | | Sbjct 3670 GATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTGACATT 3729 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| || ||||| | || || ||||| || ||||| || || || Sbjct 3730 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGAC 3789 Query 35725 AAATATCTGCATTC 35738 ||||||||||||| Sbjct 3790 GAATATCTGCATTC 3803 >seq580 Length=8796 Score = 100 bits (110), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 ||||||| | ||||||||||| || || |||||||| | ||| || || | || |||| Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||||| || ||||| || | || ||||| || | ||||| | ||||||||| | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 35649 TCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||| ||| | |||| | | || || || |||||||| | |||||||| ||| Sbjct 7983 TCTTGGCCTTGA-CGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || || ||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | | ||||| | || |||||||| || || ||||| Sbjct 8107 CTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAA 8166 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || || |||||| ||| || |||| || Sbjct 8167 AATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCC-TGAATCTTGGCTTTCACGT 8225 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| || || || || ||||||| || || | Sbjct 8226 TGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGA 8285 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 8286 CGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450656091047240