Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6019 187 2e-42 seq4583 187 2e-42 seq4584 176 4e-39 seq6955 159 3e-34 >seq6019 Length=9942 Score = 187 bits (206), Expect = 2e-42 Identities = 382/558 (68%), Gaps = 16/558 (3%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCAC-AGGCGTCATTTTGGACAGCAGAAGAAGTTGATTT 43788 || ||||| |||||||| ||| ||| |||||||||| ||||| || || || | || || Sbjct 1650 ATCTGGCAGATGTACAAGAAA-CACGAGGCGTCATTCTGGACCGCCGAGGAGATGGACTT 1708 Query 43789 GACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GAAAAACATTTTATAT 43844 | |||| || | ||| | |||| || ||| |||| || || || || | Sbjct 1709 GTCTAAGGATCTC-CACGACTGGAACAACCGAATGAACGACAATGAGCGTCACTTCATCT 1767 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 || || | || ||||||||||| |||||| || ||||| || ||| | || | Sbjct 1768 CTCATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGAAC 1827 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 | || || |||| ||||| | | ||||| || || || ||||| || || || | Sbjct 1828 GTTTCTCGAAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGA 1887 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGC 44024 | || ||||||||||| || | || ||| || || ||||||||||||||||| Sbjct 1888 TGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCG 1947 Query 44025 ACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084 | ||| | | | ||| |||| | || || | ||| || |||| ||||| | Sbjct 1948 CCCAGAGGGAATATCTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTG 2007 Query 44085 ACTGGGCCCTTAAATGGATAAATTCAAATGA---TTCT---TTTGGAGAACGACTTGTCG 44138 ||||||||||| ||||| || |||| ||| |||| || || ||||| | Sbjct 2008 ACTGGGCCCTTCGCTGGATC---TCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTAG 2064 Query 44139 CGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAA 44198 | || || | || |||||||||||||| || || |||||||| |||| |||||||| | Sbjct 2065 CCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTGA 2124 Query 44199 AGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 |||| || || ||||||||||| | ||||| ||||| ||| | || || ||||| || | Sbjct 2125 AGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGG 2184 Query 44259 GCTTACATTGCGATTTTG 44276 || | || ||| |||| Sbjct 2185 GCATGCACACCGACTTTG 2202 >seq4583 Length=9780 Score = 187 bits (206), Expect = 2e-42 Identities = 382/558 (68%), Gaps = 16/558 (3%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCAC-AGGCGTCATTTTGGACAGCAGAAGAAGTTGATTT 43788 || ||||| |||||||| ||| ||| |||||||||| ||||| || || || | || || Sbjct 6620 ATCTGGCAGATGTACAAGAAA-CACGAGGCGTCATTCTGGACCGCCGAGGAGATGGACTT 6678 Query 43789 GACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GAAAAACATTTTATAT 43844 | |||| || | ||| | |||| || ||| |||| || || || || | Sbjct 6679 GTCTAAGGATCTC-CACGACTGGAACAACCGAATGAACGACAATGAGCGTCACTTCATCT 6737 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 || || | || ||||||||||| |||||| || ||||| || ||| | || | Sbjct 6738 CTCATGTCCTCGCTTTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAATCTCGTCGAAC 6797 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 | || || |||| ||||| | | ||||| || || || ||||| || || || | Sbjct 6798 GTTTCTCGAAAGAGGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGA 6857 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGC 44024 | || ||||||||||| || | || ||| || || ||||||||||||||||| Sbjct 6858 TGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGATACGTACATCAAAGACCCCG 6917 Query 44025 ACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084 | ||| | | | ||| |||| | || || | ||| || |||| ||||| | Sbjct 6918 CCCAGAGGGAATATCTTTTTGATGCTGTCGAGACCATTCCTTGCATCAAACGCAAAGCTG 6977 Query 44085 ACTGGGCCCTTAAATGGATAAATTCAAATGA---TTCT---TTTGGAGAACGACTTGTCG 44138 ||||||||||| ||||| || |||| ||| |||| || || ||||| | Sbjct 6978 ACTGGGCCCTTCGCTGGATC---TCCGATGAACGTTCCACCTTTGCTGAGCGTCTTGTAG 7034 Query 44139 CGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAA 44198 | || || | || |||||||||||||| || || |||||||| |||| |||||||| | Sbjct 7035 CCTTCGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCGTTTGCTTCCATCTTTTGGTTGA 7094 Query 44199 AGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 |||| || || ||||||||||| | ||||| ||||| ||| | || || ||||| || | Sbjct 7095 AGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGCCGTGACGAGG 7154 Query 44259 GCTTACATTGCGATTTTG 44276 || | || ||| |||| Sbjct 7155 GCATGCACACCGACTTTG 7172 >seq4584 Length=6343 Score = 176 bits (194), Expect = 4e-39 Identities = 309/448 (69%), Gaps = 9/448 (2%) Strand=Plus/Plus Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894 |||||||| ||| ||| | || ||||||||||| ||||| || || || || || Sbjct 3290 CATTTTATCTCTCATGTTCTCGCCTTTTTTGCTGCTTCTGACGGCATCGTTAACGAGAAC 3349 Query 43895 TTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 | || || || || |||||||||| | | ||||| || || || ||||| || Sbjct 3350 CTCGTCGAACGTTTCTCGAAAGAAGTTCAGGTTGCTGAAGCTCGTTGCTTCTATGGTTTC 3409 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 || || || || ||||||||||| || | || ||| || || || || |||||| Sbjct 3410 CAGATCATGATGGAGAATATTCATTCCGAGACCTATTCTCTCCTTATCGACACATACATC 3469 Query 44015 AAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAA 44074 ||||| | ||| | | | ||| |||| || || || | ||| || ||| Sbjct 3470 AAAGACCCCGCCCAGAGGGAATATCTTTTTGATGCCATCGAGACCATTCCTTGCATCAAA 3529 Query 44075 CATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGA---TTCT---TTTGGAGAA 44128 | ||||| |||||||||||| | ||||| || |||| ||| |||| || Sbjct 3530 CGCAAAGCTGACTGGGCCCTTCACTGGATC---TCCGATGAACGTTCCACCTTTGCCGAG 3586 Query 44129 CGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATA 44188 || || || || ||||| | || |||||||||||||| || || || ||||| |||| Sbjct 3587 CGTCTCGTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCTCTGGCTCTTTTGCTTCCATC 3646 Query 44189 TTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGT 44248 |||||||| ||||| || || ||||||||||| | ||||| ||||| ||| | || || Sbjct 3647 TTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGTTCTCAAACGAGCTCATCAGC 3706 Query 44249 CGTGATGAAGGCTTACATTGCGATTTTG 44276 |||||||| ||| | || ||| |||| Sbjct 3707 CGTGATGAGGGCATGCACACCGACTTTG 3734 >seq6955 Length=16480 Score = 159 bits (176), Expect = 3e-34 Identities = 370/543 (68%), Gaps = 20/543 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||| ||||||||||||| || |||| || || ||||| || |||||| | || || Sbjct 8369 ATATGGGAAATGTACAAAAAGGCTGAGGCTTCTTTCTGGACCGCTGAAGAAATGGACTT- 8311 Query 43790 ACTAAAG-ACTTAGCACATTGGATTG-CA---TTAAAACCACAA-GAAAAACATTTTATA 43843 || || | || | | |||| | || |||| | | || ||| | || || || Sbjct 8310 ACAAATGGACATCTACGACTGGAATAACAAGCTTAA--CGAAAATGAACATCACTTCATC 8253 Query 43844 TCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT 43903 ||| || | || ||||| || || ||||| || |||||||| || |||| Sbjct 8252 TCTCACGTCCTCGCATTTTTCGCGGCTTCTGACGGCATTGTCAATGAGAACCTGGTCGAG 8193 Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 || ||| || |||| || ||| |||| ||||| || ||||| || |||||||| Sbjct 8192 CGATTTTCGAAAGAGGTGCAAGCCGCAGAGGCACGTTGCTTTTACGGCTTTCAAATCATG 8133 Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || || || || || || || | || || || || ||||| |||||||| || Sbjct 8132 ATGGAGAACATCCACTCTGAGACATATTCCCTCCTCATTGATACCTACATCAAGGAACCT 8073 Query 44024 CACGAGA-AGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAG 44081 | || || | || || |||| || |||||| |||| ||| || |||| || | Sbjct 8072 TCCCGGAGAGACTACCTT-TTCGATGCAATCGAAACAATACCATGC-ATAAAACTCAAGG 8015 Query 44082 CAGACTGGGCCCTTAAATGGATAAATTCAA--ATGATTCT---TTTGGAGAACGACTTGT 44136 | |||||||| | |||||| | | | || || || | || || || || Sbjct 8014 CTGACTGGGCTTTACGTTGGATA--TCCGACCATCGCTCCACCTTCGCGGAGCGGCTAGT 7957 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 || ||||| ||| || ||||| |||||||| |||||||||||| |||| |||||||| Sbjct 7956 TGCCTTTGCTTCTGTAGAGGGCATCTTCTTTTCTGGATCGTTTGCGTCCATCTTTTGGTT 7897 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 |||||| || || |||||||||| |||| || || |||||| | || ||||||||||| Sbjct 7896 AAAGAAGCGGGGACTGATGCCTGGTCTGACTTTCTCCAATGAGCTCATTAGTCGTGATGA 7837 Query 44257 AGG 44259 || Sbjct 7836 GGG 7834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397337791990015