Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq582 96.9 3e-15 seq580 93.3 4e-14 >seq582 Length=4044 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||| ||| | ||| || ||||| ||||| || ||||| Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||||||||| || || || | |||||||| || ||||||||||| Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||| |||| | | || | |||||| | || ||||| Sbjct 3417 ATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACC 3476 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || |||| || || |||| || || ||||| || |||||| Sbjct 3477 TCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCATA 3524 >seq580 Length=8796 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| ||||| |||||||| | |||| || | || || |||||||| || Sbjct 8102 GTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGC-CATCCTCCAGCTGTTTGCC 8160 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || ||||||||||||| || || || || | || ||||| || |||||| ||| Sbjct 8161 AGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTGGCTTT 8220 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | | || || || || || |||| || |||||||| || Sbjct 8221 CACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGT 8280 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 8281 CTTGACGAAGATTTGCAT 8298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424808019596136