Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6955 104 3e-17 seq3112 95.1 2e-14 >seq6955 Length=16480 Score = 104 bits (114), Expect = 3e-17 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||||||| || ||| || ||||| ||||| ||||| Sbjct 7816 GCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCA 7875 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || ||||||||||| |||||| | || | |||| || || || || |||||||| Sbjct 7876 GGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCA-AACGATCCAGAAAAGAAGAT 7934 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||| ||| | ||||| |||| || || || ||||||| Sbjct 7935 GCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGG 7975 >seq3112 Length=18921 Score = 95.1 bits (104), Expect = 2e-14 Identities = 212/316 (67%), Gaps = 8/316 (3%) Strand=Plus/Plus Query 182549 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCC 182608 ||| |||||||||||||| | ||||| || | |||||||| ||||| ||||| Sbjct 3577 ATCGGTCATAATCATAAGTTGGCCATACCGTAACGACGAAACATCCTGGTACTCTTTGTT 3636 Query 182609 TTGTTGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTT--TGATG--TAAGCT 182664 || || | || | |||||||||| | | || ||||| ||| | ||| | | Sbjct 3637 GTGCTGCAACCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATTTGGTC 3696 Query 182665 GTGCCACCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGT 182724 |||| | || || ||||||||| | |||||| ||||| ||||| | |||| ||| Sbjct 3697 GTGCTTC----GCCTCGCGAACATTCAAAACTTTACCACGAAGAGGGAATATACCGAAGT 3752 Query 182725 GATCACGACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCG 182784 | ||| ||||||||| ||||| || || | ||||| || ||||| || |||| Sbjct 3753 TGTTACGTCCAACGACACTAAGACCAGCCTGGGCCATAGTTTTGGCTGAATCTCCTTCCG 3812 Query 182785 TGACAATGAGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACT 182844 | | || || || || ||| | | | || || ||| ||||||||||| | | Sbjct 3813 TCAAGATAAGGGTGCAGTTTTTGGCATTTTTGGTGCCAGCCATGTTCGCGTCAGATAGTT 3872 Query 182845 TGGGAATACCGGTAAT 182860 | || | ||| ||||| Sbjct 3873 TAGGCAGACCTGTAAT 3888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627840426688800