Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6019 140 4e-28 seq4583 140 4e-28 seq4584 116 5e-21 seq6955 104 3e-17 seq3112 87.8 2e-12 >seq6019 Length=9942 Score = 140 bits (154), Expect = 4e-28 Identities = 337/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 2185 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 2126 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || | | ||| |||||||||||||| || || || || ||||| Sbjct 2125 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 2066 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 130210 || | ||||||||||||||| | || || || ||| | ||| | ||||| Sbjct 2065 GCTACAAGACGCTCAGCAAAG--GTGGAACGTT-CATCGGAGATCCAGCGAAGGGCCCAG 2009 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | || || | ||| || || | ||||| || || ||||| || | | | | | Sbjct 2008 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGG 1949 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | || |||||||||||| |||| || || ||||| || ||| ||| | | | | Sbjct 1948 GCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 1889 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAA 130389 || || | ||| | | ||||| | || ||||| | ||| ||||| | | || Sbjct 1888 ATCAT-GATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAA 1830 Query 130390 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 130449 | | || |||||| || || || ||||| |||||||||| || |||| || Sbjct 1829 ACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATG 1770 Query 130450 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGA 130506 ||||| | | ||||| ||||||| || | |||||||||| |||||||| || Sbjct 1769 AGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 1710 Query 130507 GAGATCTACCTCCTCCGCAGTCCA 130530 | || | |||||| || ||||| Sbjct 1709 CAAGTCCATCTCCTCGGCGGTCCA 1686 >seq4583 Length=9780 Score = 140 bits (154), Expect = 4e-28 Identities = 337/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 7155 CCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 7096 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || | | ||| |||||||||||||| || || || || ||||| Sbjct 7095 TTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAG 7036 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 130210 || | ||||||||||||||| | || || || ||| | ||| | ||||| Sbjct 7035 GCTACAAGACGCTCAGCAAAG--GTGGAACGTT-CATCGGAGATCCAGCGAAGGGCCCAG 6979 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | || || | ||| || || | ||||| || || ||||| || | | | | | Sbjct 6978 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGG 6919 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | || |||||||||||| |||| || || ||||| || ||| ||| | | | | Sbjct 6918 GCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 6859 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAA 130389 || || | ||| | | ||||| | || ||||| | ||| ||||| | | || Sbjct 6858 ATCAT-GATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAA 6800 Query 130390 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 130449 | | || |||||| || || || ||||| |||||||||| || |||| || Sbjct 6799 ACGTTCGACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATG 6740 Query 130450 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGA 130506 ||||| | | ||||| ||||||| || | |||||||||| |||||||| || Sbjct 6739 AGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 6680 Query 130507 GAGATCTACCTCCTCCGCAGTCCA 130530 | || | |||||| || ||||| Sbjct 6679 CAAGTCCATCTCCTCGGCGGTCCA 6656 >seq4584 Length=6343 Score = 116 bits (128), Expect = 5e-21 Identities = 332/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| |||||| |||||| || || ||||| ||||| ||||| | || |||||| Sbjct 3717 CCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 3658 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || | | ||| |||||||||||||| || || || || || || Sbjct 3657 TTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAG 3598 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 130210 || | ||||||||| |||||| | || || || ||| | ||| | | ||||| Sbjct 3597 GCTACGAGACGCTCGGCAAAG--GTGGAACGTT-CATCGGAGATCCAGTGAAGGGCCCAG 3541 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | || || | ||| || || | ||||| ||| || ||||| || | | | | | Sbjct 3540 TCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGG 3481 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | || ||||||||||| | || || || ||||| || ||| ||| | | | | Sbjct 3480 GCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCC 3421 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAA 130389 || || | ||| | | ||||| | || ||||| | ||| || || | | || Sbjct 3420 ATCAT-GATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAA 3362 Query 130390 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 130449 | | || ||||| ||| || || || || |||||||||| || || | || Sbjct 3361 ACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAAAAAGGCGAGAACATG 3302 Query 130450 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGA 130506 || || | | ||||| || |||| || | |||||||||| |||||||| || Sbjct 3301 AGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGA 3242 Query 130507 GAGATCTACCTCCTCCGCAGTCCA 130530 || || | |||||| |||||||| Sbjct 3241 CAGGTCCATCTCCTCGGCAGTCCA 3218 >seq6955 Length=16480 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||| ||||| ||||| ||||| ||||| |||||| Sbjct 7816 GCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAGAAAGTCAGACCA 7875 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || ||||||||||| ||||| || || | ||| || ||||| |||||||| Sbjct 7876 GGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCAGAAAAGAAGATG 7935 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| ||| | || || |||| || ||||| || |||| Sbjct 7936 CCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGG 7975 >seq3112 Length=18921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/293 (67%), Gaps = 10/293 (3%) Strand=Plus/Plus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||| |||||||||||||| | ||||| || | | |||||||| || || || || Sbjct 3577 ATCGGTCATAATCATAAGTTGGCCATACCGTAACGACGAAACATCCTGGTACTCTTTGTT 3636 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 179922 || || | ||||| |||||||||| | | || ||| | ||| |||| || || Sbjct 3637 GTGCTGCAACCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATTTG-GT 3695 Query 179923 TGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 179982 | || | || || || ||||| | || ||||| |||||||| | |||| || Sbjct 3696 CGTGCTTC----GCCTCGCGAACATTCAAAACTTTACCACGAAGAGGGAATATACCGAAG 3751 Query 179983 TGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 180042 | | ||| ||||| ||| |||||||| || | || || || ||||| || ||| Sbjct 3752 TTGTTACGTCCAACGACACTAAGACCAGCCTGGGCCATAGTTTTGGCTGAATCTCCTTCC 3811 Query 180043 GTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTC 180095 |||| ||| || || || ||| | | | || || ||| |||||||||| Sbjct 3812 GTCAAGATAAGGGTGCAGTTTTTGGCATTTTTGGTGCCAGCCATGTTCGCGTC 3864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618246554072680