Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq580 185 3e-41 seq582 168 2e-36 seq3333 149 2e-30 >seq580 Length=8796 Score = 185 bits (204), Expect = 3e-41 Identities = 182/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| ||||| || |||||||| ||||| || | Sbjct 8064 TTTGCATACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGT 8123 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | |||||| ||||| || || ||||| |||||||| || ||||| ||||| | Sbjct 8124 AGTCAGAGAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGT 8183 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| |||||||| |||||||| || ||||| || || ||||| | || |||| Sbjct 8184 CGGGAGGAATGCCTTCTTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATG 8243 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||||| ||||| || || || || || || || || ||||| Sbjct 8244 ACTCGACCTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 127 bits (140), Expect = 6e-24 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | || ||||| |||||||| |||||||| |||||||||| Sbjct 8571 TTTGCATGCCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCTTTCTGAATATTAT 8630 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || || || |||||||||||||| || |||||||||| Sbjct 8631 AGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATAAGTCGTTGCTGAT 8690 Query 140623 CAGGAGGAAT 140632 |||| ||||| Sbjct 8691 CAGGGGGAAT 8700 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 140534 ATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTG 140593 |||||| ||| ||| || || ||||| ||||| || || || || |||||||| || || Sbjct 7867 ATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTG 7926 Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 || || ||||| || || ||||||||||| |||||||| ||||| || ||||| || || Sbjct 7927 CTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTT 7986 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || || | ||| || | || || || || || | ||||| || || Sbjct 7987 GGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGT 8046 Query 140714 TAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| Sbjct 8047 AAGGGTCTTGACGAAGATTTGCAT 8070 >seq582 Length=4044 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | ||||| ||||| || || |||||||| ||||| ||||| || Sbjct 3293 CATACCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTC 3352 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| || || || ||||||||||| |||||||||||||| || Sbjct 3353 AGAGAGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGG 3412 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || || || || |||||||| | || || | || Sbjct 3413 CGGGATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTC 3472 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | |||| ||||| || || | || || |||||||||||||| Sbjct 3473 AACCTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||||||||||||||| || || ||||||||||| || | || || ||||| || ||| Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || ||||| || ||||| ||||||||||| ||||| || || || || || ||||| || Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 3209 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || || || ||||| | ||||| | || ||||| | |||| ||||| || Sbjct 3210 TTCGCCTTGACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCC 3269 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| |||||||| Sbjct 3270 GTCAGCGTCTTCACAAAGATCTGCAT 3295 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 |||||||| ||||| || ||||| || || || || || || | ||||| ||||| ||| Sbjct 3599 TGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGT 3658 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||| ||||| ||||| ||||| || |||||||| || || ||||||||||| || Sbjct 3659 TTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTC 3718 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | ||||| | || || ||||| |||| || |||||||| Sbjct 3719 GCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTC 3778 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | || || || || ||||||||| Sbjct 3779 AACGTCTTGACGAATATCTGCATT 3802 >seq3333 Length=34899 Score = 149 bits (164), Expect = 2e-30 Identities = 256/369 (69%), Gaps = 2/369 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||||||||| || ||||| | | || |||||||||| || || | ||| | Sbjct 9134 CCTGAAGAAATTTCTTCCATGGTCCTTTTGAAGATGAAGGAAACAGCAGAGTCCTATCTC 9075 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 ||| || | | | || ||| | || || || || || || |||||| | || || Sbjct 9074 GGTACTACCATCAACAACGCCGTTGTAACCGTTCCTGCATACTTCAATGATTCTCAACGA 9015 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || || ||||| | |||| | || | || || || | || || || || Sbjct 9014 CAGGCTACCAAGGACGCTGGAACCATTTCTGGCATGAACGTCCTCCGTATCATCAACGAG 8955 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTAT 349770 || || ||||| || ||||| ||||| ||||| || | | ||||| ||| ||| | Sbjct 8954 CCAACGGCTGCTGCTATTGCCTATGGTCTTGACAAGAAG-GTGACTGGTGAACGCAATGT 8896 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || ||||| ||| | ||||| || || || ||||| || || | || | |||||||| Sbjct 8895 CCTCATTTTCGATCTCGGTGGAGGAACCTTCGATGTGTCTCTTTTGACCATCGAAGAGGG 8836 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 ||||| ||||||||||| || |||||||| || || | || || || ||||| || || Sbjct 8835 TATTTTCGAAGTTAAAGCTACCGCTGGTGACACCCACTTGGGCGGTGAGGATTTCGACAA 8776 Query 349891 TCGTCTCGT 349899 |||||||| Sbjct 8775 CCGTCTCGT 8767 Score = 98.7 bits (108), Expect = 3e-15 Identities = 170/247 (69%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 350403 CTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCC 350462 |||||| || ||||||| || || || || | || || || || || ||||| Sbjct 8158 CTGGTGGTGTTATGACTGCCCTCATCAAGAGGAACACAACCGTCCCCACCAAGAAGTCGG 8099 Query 350463 AAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTG 350522 | ||||| || || | || || || ||||| | ||| || ||||| |||||||||| Sbjct 8098 AGACTTTCTCCACCTACGCCGACAACCAGCCGGGTGTATTGATCCAAGTGTTTGAAGGTG 8039 Query 350523 AACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCAC 350582 ||||||||||||| ||||| || || ||| || |||| || | ||||| | Sbjct 8038 AACGTGCTCGCACCAAAGACAACAACCTACTCGGTAAATTCGAGCTCTCCGGTATTCCTC 7979 Query 350583 CAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTT 350642 | ||| | || || ||||| || || || | |||||||| ||| | |||||||| | Sbjct 7978 CTGCCCCTCGTGGTGTACCTCAAATCGAGGTGACCTTCGATATCGATGCCAATGGTATCT 7919 Query 350643 TAAATGT 350649 | ||||| Sbjct 7918 TGAATGT 7912 Score = 86.0 bits (94), Expect = 2e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 ||||| | ||| ||||| || |||||||| || || || || ||||||||||| ||| | Sbjct 9536 TGTGTCGGTGTCTGGCAGAACGATCGTGTTGAGATCATCGCCAATGATCAAGGCAACCGG 9477 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 || || || || || || ||||| |||| | ||||||| | || || ||| | || || Sbjct 9476 ACGACACCCTCGTATGTCTCATTTTCCGACAATGAGCGTCTCATCGGCGATGCCGCTAAG 9417 Query 349352 AATCAAG 349358 || |||| Sbjct 9416 AACCAAG 9410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514780635350609