Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4584 113 5e-20 seq6019 109 6e-19 seq4583 109 6e-19 seq4646 82.4 8e-11 >seq4584 Length=6343 Score = 113 bits (124), Expect = 5e-20 Identities = 337/512 (66%), Gaps = 16/512 (3%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 || |||||| | | ||||||||| ||||| | || || | || ||| |||| | Sbjct 3212 TCGTTCTGGACTGCCGAGGAGATGGACCTGTCTAAGGATCTCCACGACTGGAACAACCGA 3271 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 | ||| || | |||| ||||| ||| || || ||||| || || || ||| Sbjct 3272 ATGAATGACAATGAGCGTCATTTTATCTCTCATGTTCTCGCCTTTTTTGCTGCTTCTGAC 3331 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AAGGATGTCCAGATTGCCGAGG 59787 || || || | || || | | | |||| |||| || || || ||| |||| || | Sbjct 3332 GGCATCGTTAACGAGAACCTCGTC--GAACGTTTCTCGAAAGAAGTTCAGGTTGCTGAAG 3389 Query 59788 CCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGC 59847 | || | ||||| | | ||| | | ||| ||| || |||||||| || || | Sbjct 3390 CTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAATATTCATTCCGAGACCTATTCTC 3449 Query 59848 TCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAG 59907 || | ||||| | | |||| || || | ||| || ||| || |||||| | Sbjct 3450 TCCTTATCGACACATACATCAAAGACCCCGCCCAGAGGGAATATCTTTTTGATGCCATCG 3509 Query 59908 AGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG-G 59965 |||| | || ||| | |||| ||||| || |||||| | || ||||| ||| | Sbjct 3510 AGACCATTCCTTGCA-TCAAACGCAAAGCTGACTGGGCCCTTCACTGGATC--TCCGATG 3566 Query 59966 AGCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCT 60021 | | | | ||||| | |||||| |||| ||||| ||| ||||| || ||||||| Sbjct 3567 AACGTTCCACCTTTGCCGAGCGTCTCGTAGCCTTTGCCGCCGTTGAAGGCATTTTCTTCT 3626 Query 60022 CTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTT 60081 ||||||| || | | || || ||| | || ||||||||| | ||||| || || | | Sbjct 3627 CTGGCTCTTTTGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGT 3686 Query 60082 TCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||| |||||||| || ||| || |||||| Sbjct 3687 TCTCAAACGAGCTCATCAGCCGTGATGAGGGC 3718 >seq6019 Length=9942 Score = 109 bits (120), Expect = 6e-19 Identities = 336/512 (66%), Gaps = 16/512 (3%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672 ||||||||| ||| ||||||||| ||| | | || || | || ||| |||| | Sbjct 1680 TCATTCTGGACCGCCGAGGAGATGGACTTGTCTAAGGATCTCCACGACTGGAACAACCGA 1739 Query 59673 AATTACGAC---GAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 | ||||| |||| || |||||| ||||| || || || || || || Sbjct 1740 ATGAACGACAATGAGCGTCACTTCATCTCTCATGTCCTCGCTTTTTTTGCTGCTTCCGAC 1799 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AAGGATGTCCAGATTGCCGAGG 59787 || || || | || ||| | | | |||| |||| || || || ||| |||| || | Sbjct 1800 GGCATCGTCAACGAGAATCTCGTC--GAACGTTTCTCGAAAGAGGTTCAGGTTGCTGAAG 1857 Query 59788 CCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGC 59847 | || | ||||| | | ||| | | ||| ||| || |||||||| || || | Sbjct 1858 CTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAATATTCATTCCGAGACCTATTCTC 1917 Query 59848 TCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAG 59907 || | ||||||| || |||| || || | ||| || ||| || ||| | | Sbjct 1918 TCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGGGAATATCTTTTTGATGCTGTCG 1977 Query 59908 AGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG-G 59965 |||| | || ||| | |||| ||||| || |||||| | | ||||| ||| | Sbjct 1978 AGACCATTCCTTGCA-TCAAACGCAAAGCTGACTGGGCCCTTCGCTGGATC--TCCGATG 2034 Query 59966 AGCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCT 60021 | | | | ||||| | ||||| |||| || || ||| ||||| || ||||||| Sbjct 2035 AACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCT 2094 Query 60022 CTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTT 60081 |||||||||| | | || || ||| | || ||||||||| | ||||| || || | | Sbjct 2095 CTGGCTCGTTTGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGT 2154 Query 60082 TCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||| |||||||| || ||| ||||||||| Sbjct 2155 TCTCAAACGAGCTCATCAGCCGTGACGAGGGC 2186 >seq4583 Length=9780 Score = 109 bits (120), Expect = 6e-19 Identities = 336/512 (66%), Gaps = 16/512 (3%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672 ||||||||| ||| ||||||||| ||| | | || || | || ||| |||| | Sbjct 6650 TCATTCTGGACCGCCGAGGAGATGGACTTGTCTAAGGATCTCCACGACTGGAACAACCGA 6709 Query 59673 AATTACGAC---GAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 | ||||| |||| || |||||| ||||| || || || || || || Sbjct 6710 ATGAACGACAATGAGCGTCACTTCATCTCTCATGTCCTCGCTTTTTTTGCTGCTTCCGAC 6769 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AAGGATGTCCAGATTGCCGAGG 59787 || || || | || ||| | | | |||| |||| || || || ||| |||| || | Sbjct 6770 GGCATCGTCAACGAGAATCTCGTC--GAACGTTTCTCGAAAGAGGTTCAGGTTGCTGAAG 6827 Query 59788 CCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGC 59847 | || | ||||| | | ||| | | ||| ||| || |||||||| || || | Sbjct 6828 CTCGTTGCTTCTATGGCTTCCAGATCATGATGGAGAATATTCATTCCGAGACCTATTCTC 6887 Query 59848 TCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAG 59907 || | ||||||| || |||| || || | ||| || ||| || ||| | | Sbjct 6888 TCCTTATCGATACGTACATCAAAGACCCCGCCCAGAGGGAATATCTTTTTGATGCTGTCG 6947 Query 59908 AGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG-G 59965 |||| | || ||| | |||| ||||| || |||||| | | ||||| ||| | Sbjct 6948 AGACCATTCCTTGCA-TCAAACGCAAAGCTGACTGGGCCCTTCGCTGGATC--TCCGATG 7004 Query 59966 AGCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCT 60021 | | | | ||||| | ||||| |||| || || ||| ||||| || ||||||| Sbjct 7005 AACGTTCCACCTTTGCTGAGCGTCTTGTAGCCTTCGCCGCCGTTGAAGGCATTTTCTTCT 7064 Query 60022 CTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTT 60081 |||||||||| | | || || ||| | || ||||||||| | ||||| || || | | Sbjct 7065 CTGGCTCGTTTGCTTCCATCTTTTGGTTGAAGAAGCGTGGCTTGATGCCTGGTCTCACGT 7124 Query 60082 TCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||| |||||||| || ||| ||||||||| Sbjct 7125 TCTCAAACGAGCTCATCAGCCGTGACGAGGGC 7156 >seq4646 Length=10087 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 ||||| ||| || || ||||||||||| || || || ||||||||||| || ||| Sbjct 5119 GCGCAGCTCTTCAGGGTGTCGTAGATGCCTTCTATGGAATCGTCCTTCATGCAAACGAGG 5178 Query 79744 AAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGC 79803 ||||| || | ||| || | | || || |||||||| | |||||||| ||||||| Sbjct 5179 AAGCAAGATGAGAGCTGAGGATGGGGTGTCCCAGCGTTGAATAAGGTCGGCGACGCGTGC 5238 Query 79804 GTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCG 79863 || ||| || | ||| |||| ||| ||||| ||||| | || | || Sbjct 5239 GTAAAGTACCGCTCAGACATGAGATTGTATGTCTCGAGCACGCGGTCAATATCATTACCA 5298 Query 79864 TGGATGCCGACCGCGACGCGCAT 79886 || | |||||| || || ||||| Sbjct 5299 TGAACGCCGACGGCTACACGCAT 5321 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || |||||| | ||||| | || | || || | |||||||||| | Sbjct 5321 ATGCGTGTAGCCGTCGGCGTTCATGGTAATGATATTGACCGCGTGCTCGAGACATACAAT 5262 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 || ||| || || ||| ||||||||| |||||||| | |||||||| || || | Sbjct 5261 CTCATGTCTGAGCGGTACTTTACGCACGCGTCGCCGACCTTATTCAACGCTGGGACACCC 5202 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | || ||| | || || ||||| || |||||||| || ||| || |||||| Sbjct 5201 CATCCTCAGCTCTCATCTTGCTTCCTCGTTTGCATGAAGGACGATTCCATAGAAGGCATC 5142 Query 19298 TACGAGACGCTCAAGGAGTGCGC 19320 ||||| || || ||| ||||| Sbjct 5141 TACGACACCCTGAAGAGCTGCGC 5119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548357479366320