Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq580 114 1e-20 seq582 113 4e-20 >seq580 Length=8796 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || ||||| || ||| ||||||| || || || || | || Sbjct 8299 CATGCAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATC 8240 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| || ||||| |||||||||||||| || ||||| || Sbjct 8239 GGACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCA 8180 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || |||||||| |||| || | || | || || ||||| Sbjct 8179 GCAGCGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCTGACTACAA 8120 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || ||||| ||| | || | || | ||| | || ||||| || Sbjct 8119 CATTCAGAAAGAGTCCACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 8069 >seq582 Length=4044 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || ||| ||||||| | || || || | ||| Sbjct 3523 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCC 3464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||||||||| ||||| || || || ||||| Sbjct 3463 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGGATCCCGCCGGATCAG 3404 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || ||||| || | ||||| || || | || || || ||| Sbjct 3403 CAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATAAC 3344 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| | ||| ||||| | ||| | || ||||| || Sbjct 3343 ATTCAGAAAGAGTCGACGCTGCATCTGGTTCTCCGTCTTCGCGGTGGTAT 3294 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || ||||||| || | ||||| ||||| || || |||| Sbjct 3801 ATGCAGATATTCGTCAAGACGTTGACCGGAAAAACCATTACCCTTGAGGTCGAGTCGTCT 3742 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| || || || || || || || || || Sbjct 3741 GACACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 3682 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || ||||| | || || | ||| | ||||| |||||| Sbjct 3681 CAGCGTCTGATCTTCGCTGGGAAACAGCTTGAGGATGGCAGGACTTTGTCCGACTACAAC 3622 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| |||||||| || Sbjct 3621 ATTCAGAAGGAGTCAAC 3605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434785733578560