Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq580 161 2e-34 seq582 159 8e-34 seq4313 107 4e-18 seq4646 91.5 3e-13 seq2531 91.5 3e-13 seq583 86.0 1e-11 >seq580 Length=8796 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| ||||||||||| || ||||| || || | || || | ||||| Sbjct 8087 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCC 8146 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || || || || || || ||||| ||||||| ||||| |||||| Sbjct 8147 TCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCC 8206 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||||||| || |||||||| || || ||||| || || || ||| Sbjct 8207 TGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTC 8266 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | ||||| Sbjct 8267 TTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||| || ||||| || ||||||| | || | ||||||||||||||| Sbjct 7868 TGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCAGCTGC 7927 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || ||||| ||||| || || ||||||| |||||||||||||| ||||| Sbjct 7928 TTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTATCTTG 7987 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| |||||||| || || || |||||||| ||||||||||| || || Sbjct 7988 GCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTACCAGTA 8047 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| Sbjct 8048 AGGGTCTTGACGAAGATTTGCAT 8070 Score = 114 bits (126), Expect = 3e-20 Identities = 89/106 (84%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||||||||||||||| || ||||| || || | || || | |||||| Sbjct 8315 AGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCT 8374 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 |||| ||||||||||||||| || ||||| |||||||| || |||| Sbjct 8375 TCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGGAA 8420 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||||||||||||||| || || ||||| || | | || | ||||| Sbjct 8594 AGGACAAGGTGAAGAGTGGACTCTTTCTGAATATTATAGTCGGACAAAGTGCGGCCATCC 8653 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || |||||||| || || |||||||| ||||| || ||||| |||| Sbjct 8654 TCGAGCTGCTTTCCAGCAAAGATAAGTCGTTGCTGATCAGGGGGAA 8699 >seq582 Length=4044 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || |||||||| ||||| || ||||| |||||||| | ||| || | ||||| ||||| Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||| || ||||| |||||||| || | || ||||||||||||||| Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 3209 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| || || ||||||||| || || || | || || ||||| ||| Sbjct 3210 TTCGCCTTGACGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCC 3269 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| | |||||| Sbjct 3270 GTCAGCGTCTTCACAAAGATCTGCAT 3295 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || || || || |||||||| || |||||||| || | || || Sbjct 3303 CGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAGAGCGTG 3362 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| ||||||||||| || ||||| || ||||| || || || || | ||| Sbjct 3363 CGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGGATCCCT 3422 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || ||||| |||||||| || || ||||| ||| |||||||| | Sbjct 3423 TCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAACCTCTAAC 3482 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| ||||| | |||||| Sbjct 3483 GTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 134 bits (148), Expect = 3e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || || ||||| || || ||||||||||| | ||||| | |||||||||| Sbjct 3873 CAAGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTCCA 3932 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||| || || || ||||| | ||| ||||||||||| |||| || |||||||| |||| Sbjct 3933 GCTGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTGGA 3992 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||| || || || ||||| |||||||| || |||||||| ||||| Sbjct 3993 TCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGAT 4044 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| ||||| || || ||||| || || | | ||||| ||||| || ||||| Sbjct 3598 GTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTG 3657 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || |||||||| || || || ||||| ||||||| || ||||| ||||| ||||| Sbjct 3658 TTTCCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTT 3717 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || ||||||||||| || ||||| || || || || ||||| || Sbjct 3718 CGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGT 3777 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 | ||||| || || | ||||||| Sbjct 3778 CAACGTCTTGACGAATATCTGCATT 3802 >seq4313 Length=23148 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||| ||||| ||| ||||| ||||| ||||| ||| ||||||||| Sbjct 10721 CCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATAGTGTCCGAGGATTCAACCTCA 10662 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| |||||||| ||||| || || | |||||| Sbjct 10661 AGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 10618 >seq4646 Length=10087 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 178121 GCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGC 178180 |||||||| || | ||||| || |||| |||| |||| || ||||||| || | Sbjct 4505 GCATCTTTATAAACCATGAAAGGGTTTCCTGTCTCAACTTGCGCATCGAGAATCGCATAC 4564 Query 178181 CAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAG 178240 || | || ||||||| | || | || || ||||| ||||| ||||| | |||| Sbjct 4565 CACAACTTCTGGGCTGGAACTGATTTACGTGCACGGCCTTCTTTCTCATACTTCTCGTAG 4624 Query 178241 AGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAG 178300 || | ||| || ||| || ||||| |||| | ||||||||||||||| || ||||| Sbjct 4625 AGTTTCTCAAACTCCTCGCCGTAGACTTCATGCAAACCGGGAGCCTCATTAGGACAGAAA 4684 Query 178301 AGACTCCACT 178310 || ||||| Sbjct 4685 AGCGACCACT 4694 >seq2531 Length=57720 Score = 91.5 bits (100), Expect = 3e-13 Identities = 80/97 (82%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCT 210969 |||||| || ||||| || |||||||| || || | ||||| | | ||||| || |||| Sbjct 24792 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAAGG-TACGGCCATCCTCGAGCT 24734 Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||| |||||||| || ||||||||||||||||| Sbjct 24733 GCTTGCCAGCGAAGATGAGACGTTGTTGGTCAGGAGG 24697 >seq583 Length=22390 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || ||||| || ||||| || |||||||| ||||| | || || | || || || Sbjct 99 GACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTC 158 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| |||||||| || ||||||||||| || || Sbjct 159 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158789575551095