Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq580 104 2e-17 seq582 93.3 4e-14 >seq580 Length=8796 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| |||||| || || || || || | |||||||| | || || |||||| Sbjct 8096 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAGAGTGTTCGGCCATCCTCCAGCTGT 8155 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || |||||||||||||||| || | || ||||||||| ||| | | Sbjct 8156 TTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCC-TGAATCTT 8214 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | || ||| | | | || || ||||| || |||| || ||| | || ||||| Sbjct 8215 GGCTTTCACGTTGTCAATGGTGTCCGATGACTCGACCTCCAGTGTAATAGTCTTCCCCGT 8274 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 8275 CAGGGTCTTGACGAAGATTTGCAT 8298 >seq582 Length=4044 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || ||||||||||| | ||| || || | || || || || || || || || Sbjct 3104 CTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCGGCGAA 3163 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||| |||||||| | ||| | | ||| |||||| ||| ||| |||| ||| Sbjct 3164 GATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 3222 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || ||||| || |||| ||| || | || ||||||||||| || | Sbjct 3223 TGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTCA 3282 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 3283 CAAAGATCTGCAT 3295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429417848171939