Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq580 104 2e-17 seq582 86.0 4e-12 >seq580 Length=8796 Score = 104 bits (114), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| ||||| || || || || || || || || || || Sbjct 8298 ATGCAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATCG 8239 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || ||| ||||||||||| | || || || || Sbjct 8238 GACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 8179 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATTA 23786 |||||| | || ||||| |||||||| ||||| || ||||| | || | || || Sbjct 8178 CAGCGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCT----GACTA 8123 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || ||||||||||| Sbjct 8122 CAACATTCAGAAAGAGTCCAC 8102 >seq582 Length=4044 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || || || || || | || ||||| ||| | Sbjct 3523 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCC 3464 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| ||||| | ||||| ||||| Sbjct 3463 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGGATCCCGCCGGATCAG 3404 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| ||||| || || ||||| | ||||| | || || ||| Sbjct 3403 CAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATAAC 3344 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || |||||||| || | ||| | ||| Sbjct 3343 ATTCAGAAAGAGTCGACGCTGCATCTGGTT 3314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337909072036724