Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4584 165 7e-36 seq6955 145 7e-30 >seq4584 Length=6343 Score = 165 bits (182), Expect = 7e-36 Identities = 362/539 (67%), Gaps = 15/539 (3%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| || || || | ||| || || ||||| || ||||| | || ||||| || || Sbjct 3723 TGCATGCCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCA 3664 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || | |||||| || | ||||| || ||||| ||||| |||||||| |||||| Sbjct 3663 CGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCG 3604 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGG---CTTTGTCTTTAATCCATTTTAAT 4739 ||||| ||||| | || | || || ||| || || ||||| | | Sbjct 3603 GCAAAGGCTACGAGACG---CTCGGCAAAGGTGGAACGTTCATCGGAGATCCAGTGAAGG 3547 Query 4740 GCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTA 4796 ||||||| |||||| || | ||| ||||| || | || || | ||| | ||| Sbjct 3546 GCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAAAAGATATTCC 3487 Query 4797 CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGT 4856 || | | ||||||| || || ||||| || || || ||| | || ||||| Sbjct 3486 CTCTGGGC---GGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTCGGAATGA 3430 Query 4857 ATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCG 4916 ||||| || || ||||| || || || ||||| | |||||| | || |||||||| Sbjct 3429 ATATTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTGAACTTCT 3370 Query 4917 TTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCC 4976 || | || | ||| || | ||| ||||| || || |||||| || |||||||| || Sbjct 3369 TTCGAGAAACGTTCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAAAAAGGCG 3310 Query 4977 AAAACATGAGATATAAAGT---ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAA 5033 | ||||||||| ||||| | || | |||| | | | || ||||||| | | | | Sbjct 3309 AGAACATGAGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTCGTGGAGA 3250 Query 5034 TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || |||| | || | || || ||||||| ||||| || || ||| |||||||| Sbjct 3249 TCCTTAGACAGGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTTTCTTGTACAT 3191 >seq6955 Length=16480 Score = 145 bits (160), Expect = 7e-30 Identities = 369/558 (66%), Gaps = 5/558 (1%) Strand=Plus/Plus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 |||| | ||||||||| ||| |||| ||| || || | ||||| || || || || Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || | || ||||| | || | ||| || | |||||| || | ||||| || ||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT 4718 |||||||| ||||| ||||| | ||||| || |||| || | |||| | | | Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 4719 TTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778 | ||| ||||| ||| ||||||| ||| || || | ||| || ||||| | Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 4779 ATAGCGTTAAATAATTTACTTTTTTC-AAATGGGTCTTGAATATAAGTGTCTATTAGTAG 4837 || || | || || || | | | | | || || | || || || || || || || Sbjct 8044 ATTGCATCGAA-AAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAG 8102 Query 4838 GCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGC 4897 | ||| | ||||| || || || || || || ||||| ||||||||||| | || Sbjct 8103 GGAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGC 8162 Query 4898 TTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 |||| |||| || || || |||||| || || | ||| || || || || ||||| Sbjct 8163 CTCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTC 8222 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAG--- 5014 | || || ||||| || | || ||||| || |||| ||||| | ||||| Sbjct 8223 AGAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTT 8282 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||||| | | || | ||| || | ||||||| | ||||| || || || Sbjct 8283 GTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGC 8342 Query 5075 TTCCGCTTTTTTGTACAT 5092 || || ||||||||||| Sbjct 8343 CTCAGCCTTTTTGTACAT 8360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426922590511199