Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6955 181 1e-40 seq4584 138 2e-27 seq6019 132 7e-26 seq4583 132 7e-26 >seq6955 Length=16480 Score = 181 bits (200), Expect = 1e-40 Identities = 384/569 (67%), Gaps = 12/569 (2%) Strand=Plus/Plus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| | ||| ||||| ||| || | ||| ||||| | |||||| | || || || Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || ||||| ||||| ||||| || || || | |||||| || | ||| || |||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CT 48308 |||||||| ||||| ||||| | ||||| || || | ||| || | ||| Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 | || | |||||| ||| ||||| |||||||| |||| || || |||||||| Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 || |||| || || ||| | | || || | ||| ||||| || | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 ||| | || ||||| || || || || || ||||| |||||||| || | || Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548 |||| | || ||||| | ||||||| || ||| |||||||| || || || ||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAAT-AT-----TTTTCGTTGGAAGTC 48602 ||| || |||||||| | || || || || | || |||||||| ||| | Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTT--AAG-C 8280 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 ||||||||||| | ||| || || || || | ||||||||| ||||| || || Sbjct 8281 TTGTTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAA 8340 Query 48663 GCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| || ||||| ||||| | |||||| Sbjct 8341 GCCTCAGCCTTTTTGTACATTTCCCATAT 8369 >seq4584 Length=6343 Score = 138 bits (152), Expect = 2e-27 Identities = 353/536 (66%), Gaps = 6/536 (1%) Strand=Plus/Minus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || ||||| | || || | ||||| || || |||||||| ||||| | ||||| || Sbjct 3717 CCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTC 3658 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 || | |||||| || | || ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 3657 TTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCAAAG 3598 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCA 48338 || || | ||| | | ||| ||| | | ||||| | | ||||| ||| Sbjct 3597 GCTACGAGACGCTCGGCAAAGGTGGAACGTTCATCGGAGATCCAGTGAAGGGCCCAGTCA 3538 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 || || || | ||||| || || || || |||| ||| ||| | | | | | Sbjct 3537 GCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATCAAAAAGATATTCCCTCTGGGCG 3478 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 ||||| | ||| || || || | ||| ||| | ||||| |||||||| || || Sbjct 3477 GGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATC 3418 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGT 48518 ||||| || || || || || | ||||| | | ||| || || | | || ||| Sbjct 3417 ATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAACCTGAACTTCTTTCGAGAAACGT 3358 Query 48519 TCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTA 48578 || | | ||||| || || || || ||| |||||||||||| || | ||||| Sbjct 3357 TCGACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAGCAAAAAAGGCGAGAACATGAGAG 3298 Query 48579 ATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATA 48635 ||||||| || ||| | ||| | || |||||||| | || ||| || || | Sbjct 3297 ATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACAGG 3238 Query 48636 TCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 || | || || || ||||| || |||||||| ||| || ||||| | ||| || Sbjct 3237 TCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTTTCTTGTACATCTGCCAGAT 3182 >seq6019 Length=9942 Score = 132 bits (146), Expect = 7e-26 Identities = 339/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||| ||||| | ||||| || || | |||||| || | || Sbjct 2164 TCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCA 2105 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || ||||| ||||| |||||||| ||||| || || || ||| | ||| | | Sbjct 2104 AACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAG 2045 Query 48303 CTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| ||| | | ||||| || | ||||| ||||| || || | ||||| Sbjct 2044 GTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGA 1985 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || | ||||| ||| ||| | | | | | ||||| | ||| ||||| Sbjct 1984 ATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCG 1925 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | ||| ||| | ||||| |||||||| || || ||||| || || || || Sbjct 1924 ATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAG 1865 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | ||||| | | ||| ||||| | | || ||||| | | |||||| || || Sbjct 1864 CAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACG 1805 Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 || || || |||||||||||| || | ||||| || || | || ||| Sbjct 1804 ATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCG 1745 Query 48600 GTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 ||| | || |||||||| | || ||| || || | || | || || || ||||| Sbjct 1744 TTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAG 1685 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| ||| || ||||| | ||| || Sbjct 1684 AATGACGCCTCGTGTTTCTTGTACATCTGCCAGAT 1650 >seq4583 Length=9780 Score = 132 bits (146), Expect = 7e-26 Identities = 339/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||| ||||| | ||||| || || | |||||| || | || Sbjct 7134 TCGTTTGAGAACGTGAGACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCA 7075 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || ||||| ||||| |||||||| ||||| || || || ||| | ||| | | Sbjct 7074 AACGAGCCAGAGAAGAAAATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAG 7015 Query 48303 CTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| ||| | | ||||| || | ||||| ||||| || || | ||||| Sbjct 7014 GTGGAACGTTCATCGGAGATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGA 6955 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || | ||||| ||| ||| | | | | | ||||| | ||| ||||| Sbjct 6954 ATGGTCTCGACAGCATCAAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCG 6895 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | ||| ||| | ||||| |||||||| || || ||||| || || || || Sbjct 6894 ATAAGGAGAGAATAGGTCTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAG 6835 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | ||||| | | ||| ||||| | | || ||||| | | |||||| || || Sbjct 6834 CAACGAGCTTCAGCAACCTGAACCTCTTTCGAGAAACGTTCGACGAGATTCTCGTTGACG 6775 Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 || || || |||||||||||| || | ||||| || || | || ||| Sbjct 6774 ATGCCGTCGGAAGCAGCAAAAAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCG 6715 Query 48600 GTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 ||| | || |||||||| | || ||| || || | || | || || || ||||| Sbjct 6714 TTCATTCGGTTGTTCCAGTCGTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAG 6655 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| ||| || ||||| | ||| || Sbjct 6654 AATGACGCCTCGTGTTTCTTGTACATCTGCCAGAT 6620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694456899965920