Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq6955 188 1e-42 seq6019 154 2e-32 seq4583 154 2e-32 seq4584 150 3e-31 >seq6955 Length=16480 Score = 188 bits (208), Expect = 1e-42 Identities = 383/566 (68%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 |||| | ||| ||||| ||| || | || ||||| | |||||| | || || || Sbjct 7804 AACAGCAGACACGCAAAGTCAGTGTGCATACCCTCATCACGACTAATGAGCTCATTGGAG 7863 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || || |||||||| ||||| ||||| || | |||||| || | ||| || |||||| Sbjct 7864 AAAGTCAGACCAGGCATCAGTCCCCGCTTCTTTAACCAAAAGATGGACGCAAACGATCCA 7923 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800 |||||||| ||||| ||||||| || || || || || | ||| || | ||| | Sbjct 7924 GAAAAGAAGATGCCCTCTACAGAAGCAAAGGCAACTAGCCGCTCCGCGAAGGTGGAGCGA 7983 Query 46801 T--TATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT 46857 | | || ||||| | | |||||| |||||||| |||| || || |||||||| Sbjct 7984 TGGTCGGATATCCAACGTAAAGCCCAGTCAGCCTTGAGTTTTATGCATGGTATTGTTTCG 8043 Query 46858 ATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGA 46917 || |||| || || ||| | | | || || | || ||||| || | || Sbjct 8044 ATTGCATCGAAAAGGTAGTCTCTCCGGGAAGGTTCCTTGATGTAGGTATCAATGAGGAGG 8103 Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977 ||| | || || || ||||| || || || ||||| |||||||| || | ||| Sbjct 8104 GAATATGTCTCAGAGTGGATGTTCTCCATCATGATTTGAAAGCCGTAAAAGCAACGTGCC 8163 Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037 || | || |||||| | ||||||| || || |||||||| || || || ||| Sbjct 8164 TCTGCGGCTTGCACCTCTTTCGAAAATCGCTCGACCAGGTTCTCATTGACAATGCCGTCA 8223 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCA---TCGGTAGTCAGT 47094 ||| || |||||||| | || || || || | | |||| ||| || | Sbjct 8224 GAAGCCGCGAAAAATGCGAGGACGTGAGAGATGAAGTGATGTTCATTTTCGTTAAGCTTG 8283 Query 47095 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 ||||||||||| | ||| || || || || | ||||||||| |||||||| || ||| Sbjct 8284 TTATTCCAGTCGTAGATGTCCATTTGTAAGTCCATTTCTTCAGCGGTCCAGAAAGAAGCC 8343 Query 47155 TCTGCTTTTTTATACATATTCCATAT 47180 || || ||||| ||||| | |||||| Sbjct 8344 TCAGCCTTTTTGTACATTTCCCATAT 8369 >seq6019 Length=9942 Score = 154 bits (170), Expect = 2e-32 Identities = 373/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 |||| |||| || || | ||| || || | || || | ||||| || || ||||| Sbjct 2207 ACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAG 2148 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| | |||||||| || | |||||| || | || || || ||||| ||||| Sbjct 2147 ACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAA 2088 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT--GA 46806 |||||||| || || ||||| || ||||| | ||| | | ||| | | || || Sbjct 2087 AATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTCATCGGA 2028 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | | ||||| ||||| || || | ||||| || || || | ||||| Sbjct 2027 GATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATC 1968 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 ||| ||| | | | | | ||||| | || ||||| || | ||| ||| | Sbjct 1967 AAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGT 1908 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || |||||||| || || || ||||| || || || || || | ||||||| || Sbjct 1907 CTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAAC 1848 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044 ||| |||||| | | || ||||| ||| | |||||| || || || || || ||||| Sbjct 1847 CTGAACCTCTTTCGAGAAACGTTC-GACGAGATTCTCGTTGACGATGCCGTCGGAAGCAG 1789 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCC 47101 ||||||| || | ||||| || || | ||| ||| | | | || |||| Sbjct 1788 CAAAAAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCC 1729 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 |||| | || ||| || || | || | || || || ||||||||||||||||| || Sbjct 1728 AGTCGTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTT 1669 Query 47162 TTTTATACATATTCCATAT 47180 | || ||||| | ||| || Sbjct 1668 TCTTGTACATCTGCCAGAT 1650 >seq4583 Length=9780 Score = 154 bits (170), Expect = 2e-32 Identities = 373/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 |||| |||| || || | ||| || || | || || | ||||| || || ||||| Sbjct 7177 ACATCCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTTGAGAACGTGAG 7118 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| | |||||||| || | |||||| || | || || || ||||| ||||| Sbjct 7117 ACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAACGAGCCAGAGAAGAA 7058 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT--GA 46806 |||||||| || || ||||| || ||||| | ||| | | ||| | | || || Sbjct 7057 AATGCCTTCAACGGCGGCGAAGGCTACAAGACGCTCAGCAAAGGTGGAACGTTCATCGGA 6998 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | | ||||| ||||| || || | ||||| || || || | ||||| Sbjct 6997 GATCCAGCGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGACAGCATC 6938 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 ||| ||| | | | | | ||||| | || ||||| || | ||| ||| | Sbjct 6937 AAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTACGTATCGATAAGGAGAGAATAGGT 6878 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || |||||||| || || || ||||| || || || || || | ||||||| || Sbjct 6877 CTCGGAATGAATATTCTCCATCATGATCTGGAAGCCATAGAAGCAACGAGCTTCAGCAAC 6818 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044 ||| |||||| | | || ||||| ||| | |||||| || || || || || ||||| Sbjct 6817 CTGAACCTCTTTCGAGAAACGTTC-GACGAGATTCTCGTTGACGATGCCGTCGGAAGCAG 6759 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCC 47101 ||||||| || | ||||| || || | ||| ||| | | | || |||| Sbjct 6758 CAAAAAAAGCGAGGACATGAGAGATGAAGTGACGCTCATTGTCGTTCATTCGGTTGTTCC 6699 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 |||| | || ||| || || | || | || || || ||||||||||||||||| || Sbjct 6698 AGTCGTGGAGATCCTTAGACAAGTCCATCTCCTCGGCGGTCCAGAATGACGCCTCGTGTT 6639 Query 47162 TTTTATACATATTCCATAT 47180 | || ||||| | ||| || Sbjct 6638 TCTTGTACATCTGCCAGAT 6620 >seq4584 Length=6343 Score = 150 bits (166), Expect = 3e-31 Identities = 372/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 |||| |||| || || | ||| ||||| | || || | ||||| || || ||||| Sbjct 3739 ACATCCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTTGAGAACGTGAG 3680 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| | |||||||| || | |||||| || | || ||||| ||||| ||||| Sbjct 3679 ACCAGGCATCAAGCCACGCTTCTTCAACCAAAAGATGGAAGCAAAAGAGCCAGAGAAGAA 3620 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT--GA 46806 |||||||| || || || || || || || | ||| | | ||| | | || || Sbjct 3619 AATGCCTTCAACGGCGGCAAAGGCTACGAGACGCTCGGCAAAGGTGGAACGTTCATCGGA 3560 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | ||||| ||||| || || | ||||| || || || || |||| Sbjct 3559 GATCCAGTGAAGGGCCCAGTCAGCTTTGCGTTTGATGCAAGGAATGGTCTCGATGGCATC 3500 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 ||| ||| | | | | | ||||| | ||||| || || | ||| ||| | Sbjct 3499 AAAAAGATATTCCCTCTGGGCGGGGTCTTTGATGTATGTGTCGATAAGGAGAGAATAGGT 3440 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || |||||||| || || || ||||| || || || || || | ||||||| || Sbjct 3439 CTCGGAATGAATATTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCTTCAGCAAC 3380 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAG 47044 ||| || ||| | | || ||||| ||| | ||||| || || || || ||| ||||| Sbjct 3379 CTGAACTTCTTTCGAGAAACGTTC-GACGAGGTTCTCGTTAACGATGCCGTCAGAAGCAG 3321 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCC 47101 ||||||| || | ||||| ||||||| |||| | | ||| | || |||| Sbjct 3320 CAAAAAAGGCGAGAACATGAGAGATAAAATGACGCTCATTGTCATTCATTCGGTTGTTCC 3261 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 |||| | || ||| || || | || | || || || |||||||| || ||||| || Sbjct 3260 AGTCGTGGAGATCCTTAGACAGGTCCATCTCCTCGGCAGTCCAGAACGATGCCTCGTGTT 3201 Query 47162 TTTTATACATATTCCATAT 47180 | || ||||| | ||| || Sbjct 3200 TCTTGTACATCTGCCAGAT 3182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712716928272960