Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq580 163 6e-35 seq582 159 7e-34 seq6019 122 2e-22 seq4583 122 2e-22 seq4584 114 3e-20 seq6955 111 3e-19 seq4313 109 1e-18 >seq580 Length=8796 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||||| || ||||||||||||| Sbjct 8071 ACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGA 8130 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || ||||| || ||||| || | ||| || ||||| || Sbjct 8131 GAGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGG 8190 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||| || ||||| ||||| ||| | || || |||||||| | ||||| Sbjct 8191 AATGCCTTCTTTGTCCTGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGAC 8250 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| ||||||| ||||| ||||| || ||||| Sbjct 8251 CTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCAT 8298 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 282892 CCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTA 282951 ||| ||| | || || || || ||||| ||||| || | | |||||||||||| || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 282952 GTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGA 283011 | || ||||||||||| || | ||||| || || |||||||| |||||||| || | Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCCTGTA 7982 Query 283012 TCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTAC 283071 |||| || || ||| | ||||| || ||||||| || || ||||| ||||||||||||| Sbjct 7983 TCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTAC 8042 Query 283072 CCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | ||||| ||||| || ||||| Sbjct 8043 CAGTAAGGGTCTTGACGAAGATTTGCAT 8070 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || ||| | || ||||| ||||||| || || || Sbjct 8474 CCCTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCAATAGTATCCGAAGACTCCACCTCA 8533 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 8534 AGAGTTATTGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 8577 >seq582 Length=4044 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||||||| | ||| ||||| || ||||| ||||||| Sbjct 3296 ACCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGA 3355 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| ||||| || || || || || |||||||| | |||||| || || ||| Sbjct 3356 GAGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGG 3415 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||||| || || ||| |||| |||||||| || | || || Sbjct 3416 GATCCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAAC 3475 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| || ||||| ||||| || || |||||||| Sbjct 3476 CTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 156 bits (172), Expect = 9e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| || || || | ||| || || |||||||| ||||| || ||||| ||| Sbjct 3105 TCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGTTGCTTTCCGGCGAAG 3164 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| |||||| |||||| || |||||||||||||| |||||||| || || ||| | Sbjct 3165 ATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 3224 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| || | |||||||| | || || ||||| ||||||| ||||| || Sbjct 3225 TCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTCACA 3284 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 3285 AAGATCTGCAT 3295 Score = 145 bits (160), Expect = 2e-29 Identities = 125/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| || || | || ||||||||||| || || ||||||||||||||| Sbjct 3890 TCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTCCAGCTGTTTCCCGGCAAAG 3949 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| || ||||||||| ||||| |||||||||||||||||||| || || || | Sbjct 3950 ATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTG 4009 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGAT 283063 ||||||||||| |||| || || ||||| ||||| Sbjct 4010 TCGATAGTGTCAGAAGACTCCACCTCGAGGGTGAT 4044 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | | || | ||||||||| || |||||||| || ||| Sbjct 3611 TCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAAG 3670 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||| || ||||| |||||||||||||| || || ||||| || || || | Sbjct 3671 ATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGCCTTGACATTG 3730 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | ||||| || || || || || || || ||||| ||||| ||| Sbjct 3731 TCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGACG 3790 Query 283089 AATATCTGCATT 283100 |||||||||||| Sbjct 3791 AATATCTGCATT 3802 >seq6019 Length=9942 Score = 122 bits (134), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 5/185 (3%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 ||| || |||||||| | | |||||| | ||||| || || || || || |||||| | Sbjct 2375 TCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCCGATCGTCT 2434 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 | || || || || |||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 2435 GCTTGTCGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGA 2494 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAGCGATTA-TCA 230398 | || || |||||||| || |||||||||||||| || |||||||| ||||| ||| Sbjct 2495 CATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCA--GATTACTCA 2552 Query 230399 AAGGC 230403 ||||| Sbjct 2553 AAGGC 2557 >seq4583 Length=9780 Score = 122 bits (134), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 5/185 (3%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 ||| || |||||||| | | |||||| | ||||| || || || || || |||||| | Sbjct 7345 TCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTCGCCGATCGTCT 7404 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 | || || || || |||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 7405 GCTTGTAGCCCTTGGCAACGACAAGGTGTACAACTCAACGAACCCCTTCGACTTCATGGA 7464 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAGCGATTA-TCA 230398 | || || |||||||| || |||||||||||||| || |||||||| ||||| ||| Sbjct 7465 CATGATCTCGCTCCAGGGCAAGACTAACTTCTTCGAGAAGCGCGTGTCA--GATTACTCA 7522 Query 230399 AAGGC 230403 ||||| Sbjct 7523 AAGGC 7527 >seq4584 Length=6343 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 ||| || |||||||| | | |||||| | ||||| || || || || |||||||| | Sbjct 3907 TCTCATTGGCATGAACTCCAAGCTCATGTGCCAATACATTGAGTTTGTTGCTGATCGCCT 3966 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 ||||||| || || | || || ||||| ||||||| || ||||||| || ||||| Sbjct 3967 GCTCGTGGCCCTTGGCAATGACAAGGTGTACAACTCCACAAATCCCTTCGACTTCATGGA 4026 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAA 230400 | || || || ||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 4027 CATGATCTCGCTTCAGGGCAAGACTAACTTCTTCGAGAAGCGTGTGTCAGATTATTCAAA 4086 Query 230401 GGC 230403 || Sbjct 4087 AGC 4089 >seq6955 Length=16480 Score = 111 bits (122), Expect = 3e-19 Identities = 146/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 230205 GACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAA 230264 |||||| | ||| | |||| || ||||||||||| | |||||| | || || ||||| Sbjct 7664 GACGCTCTCCCTGTCGGTCTCATAGGCATGAATGCAAAACTCATGTGTCAGTACATCGAG 7605 Query 230265 TTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAAC 230324 || || || || ||| || | || || || || |||| || ||||| ||||| | ||| Sbjct 7604 TTTGTTGCCGACCGTCTTCTTGTCGCCCTTGGAAACGAAAAGGTGTACAACTCAACCAAC 7545 Query 230325 CCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGT 230384 || |||| || ||||| | ||||| | ||||| || || || ||||| |||||||| Sbjct 7544 CCGTTCGACTTCATGGATATGATTTCCTTGCAGGGCAAGACCAATTTCTTTGAAAAGCGG 7485 Query 230385 GTCAGCGATTA-TCAAAGGCC 230404 || ||||| || |||||| Sbjct 7484 GTGTCGGATTACTCCAAGGCC 7464 >seq4313 Length=23148 Score = 109 bits (120), Expect = 1e-18 Identities = 89/107 (83%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| ||||||| || ||||| ||||| ||| | |||||||||||||| | ||| || Sbjct 10724 TACCCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATAGTGTCCGAGGATTCAACC 10665 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| |||||||||||||| | ||||| ||||| |||||||| Sbjct 10664 TCAAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 10618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046411922923562