Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq580 145 2e-29 seq582 136 1e-26 seq4313 93.3 1e-13 seq583 87.8 4e-12 >seq580 Length=8796 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || |||||||||||||||||||| || || Sbjct 8067 CAAATCTTCGTCAAGACCCTTACTGGTAAGACGATCACCCTCGAGGTGGAGTCTTCGGAT 8008 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| || ||||| || |||||| Sbjct 8007 ACCATCGACAACGTCAAGGCCAAGATACAGGACAAGGAAGGTATTCCTCCCGATCAGCAA 7948 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||| || ||||| || ||||| |||||||| | || | | ||||| || || Sbjct 7947 CGACTTATTTTTGCCGGGAAGCAGCTGGAAGATGGCCGCACGTTGTCGGATTACAATATC 7888 Query 178104 CAAAAAGA 178111 || || || Sbjct 7887 CAGAAGGA 7880 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || || || || ||||| || || ||| Sbjct 8295 CAAATCTTCGTCAAGACCCTGACGGGGAAGACTATTACACTGGAGGTCGAGTCATCGGAC 8236 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| |||||||||||||||||||| || ||||| |||||||| Sbjct 8235 ACCATTGACAACGTGAAAGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAGCAG 8176 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || |||||||| || ||||| | || || | || || ||| | Sbjct 8175 CGTCTCATTTTTGCTGGCAAACAGCTGGAGGATGGCCGAACACTCTCTGACTACAACATT 8116 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 8115 CAGAAAGAGTCCACCCTTCACCTTGT 8090 >seq582 Length=4044 Score = 136 bits (150), Expect = 1e-26 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || |||||||| || ||||| ||||| || || ||| Sbjct 3798 CAGATATTCGTCAAGACGTTGACCGGAAAAACCATTACCCTTGAGGTCGAGTCGTCTGAC 3739 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||||||||| || || || || ||||| |||||||| Sbjct 3738 ACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAGCAG 3679 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| || ||||| |||||| | |||| || ||| | Sbjct 3678 CGTCTGATCTTCGCTGGGAAACAGCTTGAGGATGGCAGGACTTTGTCCGACTACAACATT 3619 Query 178104 CAAAAAGAATCAACACTGCA 178123 || || || ||||| || || Sbjct 3618 CAGAAGGAGTCAACTCTTCA 3599 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || || || | || || || ||| ||| Sbjct 3292 CAGATCTTTGTGAAGACGCTGACGGGCAAGACCATTACGTTGGAAGTCGAGTCCTCTGAC 3233 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| |||||||| || || ||||| || ||||||||| Sbjct 3232 ACTATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAA 3173 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || || || ||||| | |||||| | |||||||| || Sbjct 3172 CGTCTGATCTTCGCCGGAAAGCAACTGGAGGATGGTCGTACTCTTTCAGATTATAATATC 3113 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || ||||| Sbjct 3112 CAGAAGGAGTCTACTCTTCATCT 3090 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || || || || || | ||||| || ||| ||| Sbjct 3520 CAGATTTTTGTCAAGACGTTGACTGGGAAGACTATTACGTTAGAGGTTGAGTCCTCCGAC 3461 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||||| ||||| ||||| ||||| ||||| |||||| Sbjct 3460 ACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGGATCCCGCCGGATCAGCAA 3401 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||||||||| | || || | || |||||| | Sbjct 3400 CGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACGCTCTCTGACTATAACATT 3341 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || |||||||| ||| Sbjct 3340 CAGAAAGAGTCGACGCTGCATCTGGTT 3314 Score = 125 bits (138), Expect = 2e-23 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 177957 ATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGAC 178016 ||||||||||||||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 4044 ATCACCCTCGAGGTGGAGTCTTCTGACACTATCGACAATGTCAAGGCCAAGATCCAAGAC 3985 Query 178017 AAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076 || || || || || || ||||| || || | ||||| ||||| |||||||| |||||| Sbjct 3984 AAGGAGGGCATTCCCCCTGACCAACAGCGCTTGATCTTTGCCGGGAAACAGCTGGAAGAT 3925 Query 178077 GGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || | || || ||||||||||| | || || || ||||| || ||||||| Sbjct 3924 GGCCGCACCCTGTCCGATTATAACATTCAGAAGGAGTCAACCCTCCATCTTG 3873 >seq4313 Length=23148 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||| || || ||||| ||| ||| ||| Sbjct 10621 CAGATTTTCGTCAAGACCCTCACGGGTAAGACGATTACTCTTGAGGTTGAATCCTCGGAC 10680 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 || ||||| ||||||||| |||||||||||||| ||||| Sbjct 10681 ACTATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGG 10721 >seq583 Length=22390 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||| || ||||| |||||||| ||||||||||| || |||||||| || || | ||| Sbjct 203 ATCCCGCCCGACCAACAACGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACT 144 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || | ||||| ||| |||| || || || || || ||||| || ||| Sbjct 143 CTCTCTGATTACAACATCCAGAAGGAGTCGACCCTTCATCTCGTCTTG 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203354837265182