Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armillaria_20fuscipes_20[genbank_20GCA_5F001679825.1_202016-07-05] 24,403 sequences; 52,984,320 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq582 150 2e-31 seq580 122 8e-23 seq583 102 8e-17 seq2531 82.4 7e-11 >seq582 Length=4044 Score = 150 bits (166), Expect = 2e-31 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||||||||||||| ||| ||||||||||||||||| ||| Sbjct 3297 CCACCGCGAAGACGGAGAACCAGATGCAGCGTCGACTCTTTCTGAATGTTATAGTCAGAG 3356 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || ||||| | || |||||||||||||| || || || || || || || ||| ||||| Sbjct 3357 AGCGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGATCCGGCGGG 3416 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||| | ||| | || || | ||| | | ||||||| ||||| | Sbjct 3417 ATCCCT-TCCTTGT-CTTGAATCTTCGCCTTCACGTTATCAATAGTGTCGGAGGACTCAA 3474 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| || || || || |||| |||||| || ||||||||||| Sbjct 3475 CCTCTAACGTAATAGTCTTCCCAGTCAACGTCTTGACAAAAATCTGCAT 3523 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || || ||||||||| || ||||| || || || || || | || || || Sbjct 3090 AGATGAAGAGTAGACTCCTTCTGGATATTATAATCTGAAAGAGTACGACCATCCTCCAGT 3149 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| |||||||| ||||| || || ||||| | ||| | | |||||||||| ||| Sbjct 3150 TGCTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 3209 Query 41777 TTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || ||| | || | || |||||| ||||| || |||| ||| || || || || Sbjct 3210 TTCGCCTTGA-CGTTGTCAATAGTGTCAGAGGACTCGACTTCCAACGTAATGGTCTTGCC 3268 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||||||| || || |||||||| Sbjct 3269 CGTCAGCGTCTTCACAAAGATCTGCAT 3295 Score = 109 bits (120), Expect = 5e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || || |||||||||||||||||| ||||| |||||||| | || || ||| Sbjct 3875 AGATGGAGGGTTGACTCCTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCTTCCAGC 3934 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || ||||| || |||| |||||||||||| | ||||| || ||||||||| Sbjct 3935 TGTTTCCCGGCAAAGATCAAGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC 3987 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| |||||||| | || | | || || ||||| || || ||||| Sbjct 3610 CTCCTTCTGAATGTTGTAGTCGGACAAAGTCCTGCCATCCTCAAGCTGTTTCCCAGCGAA 3669 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| ||||| ||||| | |||| | |||||| ||| ||| | || || | || Sbjct 3670 GATCAGACGCTGCTGGTCTGGAGGAATACCCTCCTTATCC-TGAATCTTCGCCTTGACAT 3728 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| |||||| ||||| | || || ||||| || |||| |||||| | Sbjct 3729 TGTCAATGGTGTCAGACGACTCGACCTCAAGGGTAATGGTTTTTCCGGTCAACGTCTTGA 3788 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 3789 CGAATATCTGCAT 3801 >seq580 Length=8796 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||| ||||||||||| ||||| ||| Sbjct 8072 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAG 8131 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||| ||||| || || || || ||||| ||||| | ||| Sbjct 8132 AGTGTTCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATGAGACGCTGCTGGTCGGGAGGA 8191 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || || |||||| ||| | || |||| ||| | | | ||||| ||||| || Sbjct 8192 ATGCCTTCTTTGTCC-TGAATCTTGGCTTTCACGTTGTCAATGGTGTCCGATGACTCGAC 8250 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || |||||||| ||||| ||||| || |||||| Sbjct 8251 CTCCAGTGTAATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCATG 8299 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||| ||||||||||| |||||||| Sbjct 8299 GCCACCACGGAGACGAAGGACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCGGA 8358 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || | || || | ||||||||| ||||| || |||||||||||||| | ||| Sbjct 8359 GAGAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATGAGGCGCTGTTGGTCGGGGGG 8418 Query 41755 AACGCT 41760 || ||| Sbjct 8419 AATGCT 8424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||| ||| || || ||||||||||| || || || || || | ||||| | || || | Sbjct 7863 CCAAATGAAGGGTACTCTCCTTCTGGATATTGTAATCCGACAACGTGCGGCCATCTTCCA 7922 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 ||||||| ||||| || || || || || || || | |||| | ||||||||| || Sbjct 7923 GCTGCTTCCCGGCAAAAATAAGTCGTTGCTGATCGGGAGGAATACCTTCCTTGTCC-TGT 7981 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | || || | ||| | | | || || ||||||||||| | || ||||| ||| Sbjct 7982 ATCTTGGCCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCGAGGGTGATCGTCTTA 8041 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| ||||| || ||||| Sbjct 8042 CCAGTAAGGGTCTTGACGAAGATTTGCAT 8070 >seq583 Length=22390 Score = 102 bits (112), Expect = 8e-17 Identities = 96/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || ||||| || || ||||||||| ||||| || || ||| Sbjct 82 CCTCCACGCAGACGCAAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAG 141 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || ||||| |||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct 142 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGGTCGGGCGGG 201 Query 41755 A 41755 | Sbjct 202 A 202 >seq2531 Length=57720 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || ||||| ||||||||| ||||| ||||| Sbjct 24815 CCACCACGGAGACGCAACACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTC 24756 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 | ||| || | || |||||||||||||| ||||| || || || |||||||| Sbjct 24755 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTC 24703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462162979943600