Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1796 138 1e-27 seq1723 138 1e-27 seq2729 105 6e-18 seq557 105 6e-18 seq2186 86.0 5e-12 seq2472 84.2 2e-11 >seq1796 Length=58898 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || ||||| || || |||||||| || || || ||| ||||| Sbjct 51743 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCCTCA 51802 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct 51803 AGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGG 51862 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| ||||| | ||| | || ||| Sbjct 51863 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTG 51922 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||||||| ||||| |||||||| Sbjct 51923 CCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| ||| ||||| || ||||| Sbjct 51527 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCG 51586 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||| || ||||| || || || |||||||| || ||| ||| ||| Sbjct 51587 GCAAAGATCAGACGTTGTTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTTGCCTTA 51646 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| |||||| | || | || || |||| || | ||| |||||||| || || Sbjct 51647 ACGTTATCGATGGTGTCGGATGAT-TCCACTTCGAGAGTGATCGTCTTGCCGGTGAGGGT 51705 Query 118721 TTTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 51706 CTTCACAAAGATTTGCAT 51723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || ||||||||||| || || || || ||||| ||||| ||||| Sbjct 51299 GTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCG 51358 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | ||||| |||||||| |||||||| || |||||||| || || || || Sbjct 51359 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTG 51418 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | ||||||||| | || | || || || || || ||| Sbjct 51419 ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTT 51478 Query 118722 TTTACAAAAATCTGCATG 118739 || ||||| || |||||| Sbjct 51479 TTGACAAATATTTGCATG 51496 >seq1723 Length=56463 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || ||||| || || ||||| || || || || ||| |||||| Sbjct 44024 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAGGTACGCCCGTCCTCG 43965 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| | |||||||||||||||||||| || ||||||||||||||| Sbjct 43964 AGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGG 43905 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||||||||| | ||| | || ||| Sbjct 43904 ATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTTG 43845 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||| || || || |||||||| Sbjct 43844 CCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || ||||||||||| | |||||| ||| ||||| || ||||| Sbjct 44240 GTGGATTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCG 44181 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||| || ||||| || || || |||||||| || |||||| ||| Sbjct 44180 GCGAAGATCAGACGTTGTTGATCAGGGGGGATACCCTCCTTATCCTGGATTTTTGCCTTA 44121 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| |||||| | || | || || |||| ||| | ||| |||||||| || || Sbjct 44120 ACGTTATCGATGGTGTCGGATGAT-TCCACTTCGAGGGTGATCGTCTTGCCGGTGAGGGT 44062 Query 118721 TTTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 44061 CTTCACAAAGATTTGCAT 44044 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || || || || |||||| ||||| ||||| Sbjct 44468 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGCTGCTTTCCG 44409 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | ||||| |||||||| |||||||| || |||||||| || || || || Sbjct 44408 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTC 44349 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | ||||||||| | || | || || || || || || Sbjct 44348 ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCCGTGAGGGTC 44289 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 44288 TTGACGAATATTTGCAT 44272 >seq2729 Length=38494 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | ||| ||| || || || ||||| || | ||||| ||||| | Sbjct 369 CCAAGTGAAGGGTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAA 310 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| ||||||||| ||||||||||||| || ||||| || || || |||||||| | Sbjct 309 GCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGA 250 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||||| | | ||||||||| | ||| | ||| || | Sbjct 249 TCTTCGCCTTGACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTAC 190 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| || || || |||||||| Sbjct 189 CCGTGAGAGTCTTGACGAAGATCTGCAT 162 >seq557 Length=42797 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || ||| || || ||||| |||||| | ||||| ||||| | Sbjct 23692 CCAAGTGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAA 23751 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || ||| ||||||||||||| || ||||| || || |||||||||||| | Sbjct 23752 GCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGA 23811 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || ||||| | |||| ||||| | | ||||||||| | ||| | || || | Sbjct 23812 TCTTCGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTAC 23871 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || || |||||||| Sbjct 23872 CCGTGAGGGTCTTGACGAAGATCTGCAT 23899 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| || |||||||| || || Sbjct 23931 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCG 23990 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGA---GGTATGC-CCTCCTTGTCTGTAATTTTTTG 118657 || |||||||||| ||||| |||||| || | | ||||||||||| | | | Sbjct 23991 GCAAAGATGAGACGTTGCTGGTCGGGACGGGGGANNCGCCTCCTTGTCTTGA--TCTGGC 24048 Query 118658 TTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAG 118717 || || | |||| ||||| | | ||||||||||| || | || ||||| || || Sbjct 24049 CTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTGAG 24108 Query 118718 AGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| |||||||| Sbjct 24109 AGTCTTGACAAAGATCTGCAT 24129 >seq2186 Length=87839 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | ||||| || || || |||||||| ||||| | |||||| |||||| Sbjct 62886 CACAAGGTGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGTCCATCCTC 62945 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || |||||| |||| || |||||||| || || || |||| Sbjct 62946 GAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGC 62992 >seq2472 Length=20097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| |||||||||||| Sbjct 115 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 174 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 || |||||| |||| | ||||||||||||||||| |||| Sbjct 175 CTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGGATGC 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433783242499948