Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1796 120 2e-22 seq1723 111 1e-19 seq2729 109 4e-19 seq557 109 4e-19 >seq1796 Length=58898 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| |||| ||| |||| || | ||||||||| ||||| Sbjct 51761 TCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAAG 51820 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || ||||| ||| ||| | || ||||||||| ||||| ||| | | | Sbjct 51821 ATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 51880 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| ||| || || || | ||||| || ||||| || |||||||| ||| Sbjct 51881 TCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGACA 51940 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 51941 AAGATCTGCAT 51951 Score = 118 bits (130), Expect = 7e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 |||| || | ||| ||| ||||| ||||||||||| |||||| ||| |||| || | Sbjct 51288 CCAGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAA 51347 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 |||||| || ||||||||||| |||||||||||| || | | |||||| || | Sbjct 51348 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGA 51407 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | | | | |||| || | || ||||| |||| ||| || || || | Sbjct 51408 TCTTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTAC 51467 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| ||||| ||||| || ||||| Sbjct 51468 CCGTGAGGGTTTTGACAAATATTTGCAT 51495 >seq1723 Length=56463 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| |||||| ||| | || || | |||||| || |||||| Sbjct 44462 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGCTGCTTTCCGGCGAAA 44403 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| || | | |||||| || ||||| ||| | | | Sbjct 44402 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTCACGTTG 44343 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| |||| ||||||||| || || ||||| || || || Sbjct 44342 TCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACG 44283 Query 34379 AAGATCTGCAT 34389 || || ||||| Sbjct 44282 AATATTTGCAT 44272 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| ||||| |||| ||| |||| || | |||||| || |||||| Sbjct 44006 TCCTTCTGGATGTTATAGTCAGACAAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAA 43947 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| ||| ||| | || ||||||||| ||||| ||| | | Sbjct 43946 ATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTA 43887 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| ||| ||||| || | || || || ||||| || ||||| || || Sbjct 43886 TCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACG 43827 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 43826 AAGATCTGCAT 43816 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| || ||||| | || ||| ||||| |||||||| || || Sbjct 44270 CCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAA 44211 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||||| || ||||| || || || || || || ||| Sbjct 44210 AGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGG 44151 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAA----TCGGTCGATTC 34338 | | |||||| || || |||||| ||| | |||||| |||| ||||| Sbjct 44150 ATACCCTCCTTATCCTGGAT-TTTTGCCTTAAC---GTTATCGATGGTGTCGGATGATTC 44095 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | ||||| || ||||||||||| || ||||||||||| ||||| Sbjct 44094 CACTTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 >seq2729 Length=38494 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 ||| ||| | ||||| || ||||| || |||||||| || ||| || |||| || | Sbjct 369 CCAAGTGAAGGGTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAA 310 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 |||||| || ||||| ||||| ||||| |||||| ||| | | |||||||| | Sbjct 309 GCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGA 250 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | || | |||| || | || ||||| |||| ||||| || || | Sbjct 249 TCTTCGCCTTGACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTAC 190 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||||||| || || ||||||||||| Sbjct 189 CCGTGAGAGTCTTGACGAAGATCTGCAT 162 >seq557 Length=42797 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 ||| ||| | || || || ||||| ||||| || ||||| || || |||| || | Sbjct 23692 CCAAGTGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAA 23751 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 ||||||||| ||||| ||||| ||||| |||||| ||| | | ||||||||| | Sbjct 23752 GCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGA 23811 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | || | |||| |||| || ||||| |||| || ||||| || | Sbjct 23812 TCTTCGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTAC 23871 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| || || || ||||||||||| Sbjct 23872 CCGTGAGGGTCTTGACGAAGATCTGCAT 23899 Score = 104 bits (114), Expect = 2e-17 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| |||||||| || || || || |||| Sbjct 23916 AGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCT 23975 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG--ACGGG---CACGCTCTCCT 34292 || | ||||||||| || || ||||| || ||||||||| ||||| ||| ||||| Sbjct 23976 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGGGGGANNCGC-CTCCT 24034 Query 34293 TGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 |||| |||| ||| | | | | |||| |||| || ||||| || | ||||| Sbjct 24035 TGTCTTG-ATCTGGC-CTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGA 24092 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| |||||||| || |||||||||||||| Sbjct 24093 TGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 24129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323036881972640