Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1717 183 3e-41 seq2640 165 7e-36 seq2085 122 8e-23 seq1739 122 8e-23 seq1723 102 7e-17 seq1796 98.7 9e-16 seq2729 96.9 3e-15 seq557 89.7 5e-13 >seq1717 Length=72410 Score = 183 bits (202), Expect = 3e-41 Identities = 390/579 (67%), Gaps = 15/579 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| ||||| || || ||||| | |||||| | ||||| Sbjct 62330 ATCTGGCAAATGTACAAAAAGGCCGAAGCTTCTTTCTGGACTGCCGAAGAGATGGACCTC 62389 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 |||||||||||| ||| ||| | | || || ||| | ||||||| Sbjct 62390 TCTAAGGATCTGCACGACTGGACGAACAGGATGAATGACAACGAGCGTCATTTTATCTCC 62449 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| |||| || || || || || || ||||| || || ||||| | || || | Sbjct 62450 CACGTTCTGGCTTTCTTTGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTAGAGCGT 62509 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| || | ||||||| | ||||| ||||| || || | || Sbjct 62510 TTCTCCAACGAAGTTCAGGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGATG 62569 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || ||||| | || ||||||||||||||||| ||| | |||| || | Sbjct 62570 GAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCCGCC 62629 Query 57867 GAGAAACGTA---GACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 ||| |||| |||||||| | || |||| || || || ||| ||||| Sbjct 62630 GAG---CGTACCCGACTGTTCGATGCTGTCGAGACTATTCCATGCATCAAACGTAAGGCG 62686 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| || | || ||||| || || | | || || |||||| | || | Sbjct 62687 GATTGGGCACTGAAGTGGATTTC---CGACAAGCAATCGACCTTTGCCGAGCGTCTGGTT 62743 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || || ||| || || || || |||||| Sbjct 62744 GCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGATG 62803 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||||| || || || || ||||||| | || || || ||| Sbjct 62804 AAGAAGCGTGGCCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGCCGTGATGAG 62863 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 || | || || || ||||| ||| | | | ||||||| Sbjct 62864 GGCATGCACACCGACTTTGCTTGCTTGCTCTTCTCTCAC 62902 >seq2640 Length=24278 Score = 165 bits (182), Expect = 7e-36 Identities = 390/584 (67%), Gaps = 25/584 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||| || ||||| ||||| || || ||||| | || || | ||||| Sbjct 17053 ATCTGGCAAATGTATAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTC 17112 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAA----ATTTTATTAA 57685 |||||||| ||| ||| ||| | | | |||| | ||| | ||||| Sbjct 17113 TCTAAGGACCTGCACGACTGG-ACGAACAAGATGAATGACAACGAACGTCACTTTATCTC 17171 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 ||||| |||| || ||||| || || || ||||| || || ||||| | || || | Sbjct 17172 TCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTTGAGCG 17231 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 || || | ||||| |||| ||||||| | ||||| ||||| || || | || Sbjct 17232 TTTCTCCAACGAAGTTCAAGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 17291 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || ||||| | || ||||||||||||||||| ||| | |||| || Sbjct 17292 GGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCCGC 17351 Query 57866 CGAGAAACGTA---GACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AA 57919 |||| |||| |||||||| | || |||| || || || || |||| || Sbjct 17352 CGAG---CGTACCCGACTGTTCGATGCTGTCGAGACTATTCCATGCAT---CAAGCGTAA 17405 Query 57920 GGCAGAGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGC 57975 ||| || ||| || | || ||||| | |||| | | || || |||||| | | Sbjct 17406 GGCCGATTGGGCACTGAAGTGGATTTCCGACAAGC----AGTCAACCTTTGCCGAGCGTC 17461 Query 57976 TAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTT 58035 || | || |||||||| || || ||||| ||||| || ||| ||| || || || || | Sbjct 17462 TAGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGCTCCTTCGCTGCTATCTTCT 17521 Query 58036 GGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCG 58095 ||||||| || || || || |||||||| || || || |||||| | || || | Sbjct 17522 GGATGAAAAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCCAACGAACTTATCAGCCGTG 17581 Query 58096 ACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 | || || | || || || ||||| ||| | | | ||||||| Sbjct 17582 ATGAAGGCATGCACACCGACTTTGCTTGCTTGCTCTTCTCTCAC 17625 >seq2085 Length=44481 Score = 122 bits (134), Expect = 8e-23 Identities = 156/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 23353 CATAAAA-AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| | ||||| ||||| ||||||| || ||||| || | | ||||| Sbjct 23607 CATACAAGAGATCAGAGATCCAGAGAGCATAGAACAAATCACGGGCACGTAGTTGCTCTT 23666 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 |||| ||||| |||| || | || || || | ||| | ||||| ||||| |||| Sbjct 23667 TGCCATGATTCTTCCTCAAGTCGAGGAACTCGAAGATGTCATCGTGCCATGGCTCAAGGT 23726 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||||| || || | ||| ||||||||||| ||||||||||| || ||| | Sbjct 23727 AGATAGCAAACGCTCCGGGACGCTTGTTGCCGCCCTGGTCGACGTAACGAGCAGTGGCAT 23786 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||| |||||| || |||| ||||| || Sbjct 23787 CATATGCTCGTAGCATGGGGACGATGCCGTTTGA 23820 >seq1739 Length=117728 Score = 122 bits (134), Expect = 8e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 23663 TTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAA 23722 || ||||| ||||||||||||||||| ||| ||||| | || | ||| |||||| Sbjct 52535 TTGAGAGTATCGTAGATGCCCTCGATCGAGTCGTCTTTCATGCACACGAGGAAGCACGAA 52594 Query 23723 GACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTAT 23782 | ||| | ||||| ||| |||| ||||||||| || || ||||| ||||| Sbjct 52595 CTAAGTTGGGGGTTGGGGGTACCGGCGTTGAACAGTGTAGGTGAAGCATGCGTGAAGTAG 52654 Query 23783 CCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCG 23842 | | |||||||||||||| || |||||| || || || ||||| || || || ||| Sbjct 52655 CGCTCGGACATTAGATTGTATGTCTCGATGACGCGCTCGATATCCTCGCCATGGATGCCG 52714 Query 23843 ATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAAC 23902 | | ||| ||||| ||||||| || || | ||| | |||||| | | Sbjct 52715 ACAGAGACACGCATGATCATGTGCTGGGGGCGCTCTGCAACTCGGCCGTTGAGACGAAGG 52774 Query 23903 AGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 ||||||||||||| | ||||| |||||||| Sbjct 52775 AGATATGAACGTTCAAGTGTTTTGAATCCAAA 52806 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428 ||||| ||||| ||||||| || ||||| |||| | ||| |||||| ||||| || Sbjct 52190 ATCCAGAGAGCATAGAACAAATCACGGGCACGCAGTTGCTCCTTGCCGTGATTCTTCCTC 52249 Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488 | || | || || || | ||| | ||||| ||||||||||| | |||||||| || Sbjct 52250 AGGTCGAGGAACTCAAAGATGTCATCGTGCCATGGCTCGAGGTAGATAGCAAACGCTCCG 52309 Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548 || | |||||||| ||||| ||||||||||| || ||| | || ||| || ||| Sbjct 52310 GGACGTTTATTGCCACCCTGGTCGACGTAACGAGCGGTGGCATCATATGCTCGTAACATG 52369 Query 23549 GGCACGAGACCGTTGGA 23565 || |||| ||| || || Sbjct 52370 GGGACGATACCATTTGA 52386 >seq1723 Length=56463 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || || ||| | || || || ||||| Sbjct 43816 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACTATTACCCTTGAGGTCGAGTCGTCC 43875 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||| ||| | || ||||| ||| Sbjct 43876 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCCGATCAG 43935 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || ||| || || || |||||| Sbjct 43936 CAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGACGGGCGTACCTTGTCTGACTATAAC 43995 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || || ||| |||| ||| | || | || |||| Sbjct 43996 ATCCAGAAGGAGTCCACCCTCCATTTGGTCCTTCGTCTCCGCGGTGGTA 44044 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || ||||| | || || || | || Sbjct 44272 ATGCAAATATTCGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAGGTCGAGTCATCA 44331 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| || | || ||||||||| Sbjct 44332 GACACGATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAG 44391 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| | || || | || || || || ||| Sbjct 44392 CAGCGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACGCTGTCGGACTACAAC 44451 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGG 31400 ||||| || || |||||||||||||||| Sbjct 44452 ATTCAGAAGGAGTCGACTCTTCATCTGG 44479 >seq1796 Length=58898 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || |||||||| ||||| || |||||| | || ||||| ||||| Sbjct 51951 ATGCAGATCTTTGTCAAAACTCTGACGGGCAAGACTATCACCCTTGAGGTTGAGTCGTCC 51892 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||| ||| | || ||||| ||| Sbjct 51891 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCCGATCAG 51832 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||||||||| ||| | || ||| || || || || ||| Sbjct 51831 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGTACCTTGTCTGACTACAAC 51772 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || || ||| |||| ||| | || | || |||| Sbjct 51771 ATCCAGAAGGAGTCCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGGTA 51723 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || || || || || || || || | || || || | || Sbjct 51496 CATGCAAATATTTGTCAAAACCCTCACGGGTAAGACTATTACGTTGGAGGTCGAGTCATC 51437 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||| ||||| || | || |||||||| Sbjct 51436 AGACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCA 51377 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| || || ||| | || ||| | || || || || || Sbjct 51376 GCAGCGCCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGTCGTACGCTGTCGGACTACAA 51317 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGG 31400 |||||| || ||||||||||||||||||| Sbjct 51316 CATTCAGAAGGAATCGACTCTTCATCTGG 51288 >seq2729 Length=38494 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || ||||||||| | || || || | || Sbjct 162 ATGCAGATCTTCGTCAAGACTCTCACGGGTAAGACGATCACCCTGGAGGTCGAGTCCTCT 221 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || |||||||||||| | || |||||||| Sbjct 222 GACACGATCGATAATGTCAAGGCGAAGATCCAGGACAAGGAAGGTATTCCCCCCGACCAA 281 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || |||||||| || ||| | || ||| Sbjct 282 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGAC 317 >seq557 Length=42797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 162/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || ||||| |||| || || | ||| Sbjct 24129 ATGCAGATCTTTGTCAAGACTCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 24070 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG----CCG-CCCG 31307 |||| |||| | || || ||| | |||||||| |||| ||| |||| Sbjct 24069 GACACGATCGACAACGTGAAGGCCAGATCAA--GACAAGGA-GGCGNNTCCCCCGTCCCG 24013 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||| ||||| || || || ||||| ||| | |||||| | ||| | |||| Sbjct 24012 ACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTTTCGGATT 23953 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| || || || || |||||||| || || ||| | || | || |||| Sbjct 23952 ACAACATCCAGAAGGAGTCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 23899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445716702618480